STRINGSTRING
BLASA_2596 BLASA_2596 ligA ligA ligB ligB gcvT2 gcvT2 gcvT3 gcvT3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BLASA_2596Predicted hydrolase or acyltransferase of alpha/beta superfamily; Function of strongly homologous gene; enzyme. (245 aa)
ligAProtocatechuate 4,5-dioxygenase, alpha chain; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (122 aa)
ligBProtocatechuate 4,5-dioxygenase, beta chain; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (285 aa)
gcvT2Aminomethyltransferase; Function of strongly homologous gene; enzyme; Belongs to the GcvT family. (453 aa)
gcvT3Aminomethyltransferase; Function of strongly homologous gene; enzyme; Belongs to the GcvT family. (466 aa)
Your Current Organism:
Blastococcus saxobsidens
NCBI taxonomy Id: 1146883
Other names: B. saxobsidens DD2, Blastococcus saxobsidens DD2, Blastococcus saxobsidens str. DD2, Blastococcus saxobsidens strain DD2
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