STRINGSTRING
BLASA_0408 BLASA_0408 BLASA_3447 BLASA_3447 BLASA_4128 BLASA_4128 BLASA_4131 BLASA_4131 rfbA2 rfbA2 rfbB2 rfbB2 BLASA_4158 BLASA_4158
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BLASA_0408Putative Glycosyltransferase-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (306 aa)
BLASA_3447Transposase; Function of strongly homologous gene; enzyme. (470 aa)
BLASA_4128Glycosyltransferase; Function of strongly homologous gene; enzyme. (309 aa)
BLASA_4131Glycosyl transferase; Function of strongly homologous gene; enzyme. (363 aa)
rfbA2Lipopolysaccharide exporter (ABC2 transporter); Function of strongly homologous gene; transporter. (302 aa)
rfbB2Lipopolysaccharide exporter; Function of strongly homologous gene; transporter. (412 aa)
BLASA_4158Predicted glycosyltransferase; Function of strongly homologous gene; enzyme. (353 aa)
Your Current Organism:
Blastococcus saxobsidens
NCBI taxonomy Id: 1146883
Other names: B. saxobsidens DD2, Blastococcus saxobsidens DD2, Blastococcus saxobsidens str. DD2, Blastococcus saxobsidens strain DD2
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