(19 nodes) Peptide transport, and ABC transporter type 1, GsiC-like, N-terminal domain network (Blastococcus saxobsidens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	dppA	ABC-type dipeptide transport system, periplasmic component; Function of strongly homologous gene; transporter. (510 aa)
	dppB	ABC-type dipeptide/oligopeptide/nickel transport system, permease component; Function of strongly homologous gene; transporter. (295 aa)
	dppC	ABC-type dipeptide/oligopeptide/nickel transport system, permease component; Function of strongly homologous gene; transporter. (332 aa)
	dppD	Oligopeptide ABC transporter (ATP-binding protein); Function of strongly homologous gene; enzyme; Belongs to the ABC transporter superfamily. (376 aa)
	dppF	Oligopeptide/dipeptide ABC transporter ATP-binding protein; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the ABC transporter superfamily. (348 aa)
	oppA	ABC-type oligopeptide transport system, substrate-binding component; Function of strongly homologous gene; transporter. (551 aa)
	oppB	Oligopeptide ABC transporter permease subunit, substrate-binding; Function of strongly homologous gene; transporter. (307 aa)
	oppC	ABC dipeptide transporter permease protein; Function of strongly homologous gene; transporter. (317 aa)
	oppD	Oligopeptide transport protein (ABC superfamily, ATP-binding protein); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the ABC transporter superfamily. (354 aa)
	oppF2	Oligopeptide transport protein (ABC superfamily, ATP-binding protein); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the ABC transporter superfamily. (360 aa)
	BLASA_1692	Putative Extracellular solute-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (526 aa)
	BLASA_1693	Putative ABC transporter permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter. (313 aa)
	BLASA_1694	Putative ABC transporter permease and ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (589 aa)
	BLASA_1695	ABC transporter ATP-binding protein; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily. (311 aa)
	BLASA_2833	ABC transporter protein, ATP-binding protein; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily. (345 aa)
	oppD2	Oligopeptide transport protein (ABC superfamily, ATP-binding protein); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the ABC transporter superfamily. (370 aa)
	BLASA_2835	Dipeptide transporter; Function of strongly homologous gene; transporter. (329 aa)
	BLASA_2836	Putative peptide transport system permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (321 aa)
	BLASA_2837	Putative Extracellular solute-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (584 aa)

Your Current Organism:

Blastococcus saxobsidens

NCBI taxonomy Id: 1146883
Other names: B. saxobsidens DD2, Blastococcus saxobsidens DD2, Blastococcus saxobsidens str. DD2, Blastococcus saxobsidens strain DD2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BLASA_1692	BLASA_1693	BLASA_1692	BLASA_1693	Putative Extracellular solute-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Putative ABC transporter permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.	0.943
BLASA_1692	BLASA_1694	BLASA_1692	BLASA_1694	Putative Extracellular solute-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Putative ABC transporter permease and ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.959
BLASA_1692	BLASA_1695	BLASA_1692	BLASA_1695	Putative Extracellular solute-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	ABC transporter ATP-binding protein; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily.	0.909
BLASA_1692	BLASA_2833	BLASA_1692	BLASA_2833	Putative Extracellular solute-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	ABC transporter protein, ATP-binding protein; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily.	0.660
BLASA_1692	BLASA_2835	BLASA_1692	BLASA_2835	Putative Extracellular solute-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Dipeptide transporter; Function of strongly homologous gene; transporter.	0.858
BLASA_1692	BLASA_2836	BLASA_1692	BLASA_2836	Putative Extracellular solute-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Putative peptide transport system permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.865
BLASA_1692	dppB	BLASA_1692	BLASA_0287	Putative Extracellular solute-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	ABC-type dipeptide/oligopeptide/nickel transport system, permease component; Function of strongly homologous gene; transporter.	0.865
BLASA_1692	dppC	BLASA_1692	BLASA_0288	Putative Extracellular solute-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	ABC-type dipeptide/oligopeptide/nickel transport system, permease component; Function of strongly homologous gene; transporter.	0.860
BLASA_1692	dppD	BLASA_1692	BLASA_0289	Putative Extracellular solute-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Oligopeptide ABC transporter (ATP-binding protein); Function of strongly homologous gene; enzyme; Belongs to the ABC transporter superfamily.	0.707
BLASA_1692	dppF	BLASA_1692	BLASA_0290	Putative Extracellular solute-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Oligopeptide/dipeptide ABC transporter ATP-binding protein; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the ABC transporter superfamily.	0.672
BLASA_1692	oppB	BLASA_1692	BLASA_0935	Putative Extracellular solute-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Oligopeptide ABC transporter permease subunit, substrate-binding; Function of strongly homologous gene; transporter.	0.839
BLASA_1692	oppC	BLASA_1692	BLASA_0936	Putative Extracellular solute-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	ABC dipeptide transporter permease protein; Function of strongly homologous gene; transporter.	0.839
BLASA_1692	oppD	BLASA_1692	BLASA_0937	Putative Extracellular solute-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Oligopeptide transport protein (ABC superfamily, ATP-binding protein); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the ABC transporter superfamily.	0.662
BLASA_1692	oppD2	BLASA_1692	BLASA_2834	Putative Extracellular solute-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Oligopeptide transport protein (ABC superfamily, ATP-binding protein); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the ABC transporter superfamily.	0.715
BLASA_1692	oppF2	BLASA_1692	BLASA_0938	Putative Extracellular solute-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Oligopeptide transport protein (ABC superfamily, ATP-binding protein); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the ABC transporter superfamily.	0.681
BLASA_1693	BLASA_1692	BLASA_1693	BLASA_1692	Putative ABC transporter permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.	Putative Extracellular solute-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.943
BLASA_1693	BLASA_1694	BLASA_1693	BLASA_1694	Putative ABC transporter permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.	Putative ABC transporter permease and ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.991
BLASA_1693	BLASA_1695	BLASA_1693	BLASA_1695	Putative ABC transporter permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.	ABC transporter ATP-binding protein; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily.	0.981
BLASA_1693	BLASA_2833	BLASA_1693	BLASA_2833	Putative ABC transporter permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.	ABC transporter protein, ATP-binding protein; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily.	0.873
BLASA_1693	BLASA_2835	BLASA_1693	BLASA_2835	Putative ABC transporter permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.	Dipeptide transporter; Function of strongly homologous gene; transporter.	0.892