STRINGSTRING
sucB sucB aceE aceE nuoM nuoM fdn fdn glpD glpD narG narG narH narH narI narI BLASA_4571 BLASA_4571 kgd kgd gpsA gpsA narG2 narG2 BLASA_4076 BLASA_4076 glpD2 glpD2 nuoM2 nuoM2 nuoG nuoG nuoF nuoF nuoE nuoE nuoF2 nuoF2 hupS hupS fdnG3 fdnG3 BLASA_2962 BLASA_2962 BLASA_2958 BLASA_2958 paaC paaC paaB paaB paaA paaA gcvP gcvP gcvH gcvH boxB boxB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sucBDihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (622 aa)
aceEPyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (938 aa)
nuoMNADH-quinone oxidoreductase subunit M; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (532 aa)
fdnFormate dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (190 aa)
glpDGlycerol-3-phosphate dehydrogenase 1; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (501 aa)
narGNitrate reductase alpha chain (fragment); Function of strongly homologous gene; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (670 aa)
narHNitrate reductase beta chain; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (567 aa)
narINitrate reductase gamma chain; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (246 aa)
BLASA_4571Aromatic-ring-hydroxylating dioxygenase, small subunit; Function of strongly homologous gene; enzyme. (169 aa)
kgd2-oxoglutarate decarboxylase; Function of strongly homologous gene; enzyme. (1254 aa)
gpsAGlycerol-3-phosphate dehydrogenase [NAD(P)+]; Function of strongly homologous gene; enzyme; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (331 aa)
narG2Nitrate reductase alpha chain (fragment); Function of strongly homologous gene; enzyme. (562 aa)
BLASA_4076Homologs of previously reported genes of unknown function. (216 aa)
glpD2Glycerol-3-phosphate dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (604 aa)
nuoM2NADH-quinone oxidoreductase subunit M; Function of strongly homologous gene; enzyme. (538 aa)
nuoGNADH-quinone oxidoreductase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (829 aa)
nuoFNADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F) (NDH-1, chain F); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (442 aa)
nuoENADH:ubiquinone oxidoreductase, chain E; Function of strongly homologous gene; enzyme. (361 aa)
nuoF2NADH-quinone oxidoreductase subunit F; Function of strongly homologous gene; enzyme. (415 aa)
hupSUptake hydrogenase small subunit (Hydrogenlyase) (Membrane-bound hydrogenase small subunit); Function of strongly homologous gene; enzyme. (355 aa)
fdnG3Formate dehydrogenase, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (186 aa)
BLASA_2962Uncharacterized anaerobic dehydrogenase (fragment); Homologs of previously reported genes of unknown function. (408 aa)
BLASA_2958Uncharacterized anaerobic dehydrogenase (fragment); Homologs of previously reported genes of unknown function; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. (382 aa)
paaCPhenylacetic acid degradation protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (303 aa)
paaBPhenylacetate-CoA oxygenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (121 aa)
paaAPhenylacetic acid degradation protein paaA; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (325 aa)
gcvPGlycine cleavage system P-protein (glycine dehydrogenase); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (1012 aa)
gcvHGlycine cleavage system H-protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (134 aa)
boxBBenzoyl-CoA oxygenase (BoxB); Function of homologous gene experimentally demonstrated in an other organism; enzyme. (493 aa)
Your Current Organism:
Blastococcus saxobsidens
NCBI taxonomy Id: 1146883
Other names: B. saxobsidens DD2, Blastococcus saxobsidens DD2, Blastococcus saxobsidens str. DD2, Blastococcus saxobsidens strain DD2
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