(6 nodes) Amidase, conserved site network (Blastococcus saxobsidens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BLASA_2526	Amidase; Function of strongly homologous gene; enzyme; Belongs to the amidase family. (468 aa)
	BLASA_4950	Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Function of strongly homologous gene; enzyme; Belongs to the amidase family. (472 aa)
	BLASA_4557	Amidase; Function of strongly homologous gene; enzyme; Belongs to the amidase family. (470 aa)
	gatA	Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A); Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). (507 aa)
	amiB	Putative amidase amiB2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the amidase family. (480 aa)
	nylA	6-aminohexanoate-cyclic-dimer hydrolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the amidase family. (483 aa)

Your Current Organism:

Blastococcus saxobsidens

NCBI taxonomy Id: 1146883
Other names: B. saxobsidens DD2, Blastococcus saxobsidens DD2, Blastococcus saxobsidens str. DD2, Blastococcus saxobsidens strain DD2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BLASA_2526	gatA	BLASA_2526	BLASA_3860	Amidase; Function of strongly homologous gene; enzyme; Belongs to the amidase family.	Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A); Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).	0.916
gatA	BLASA_2526	BLASA_3860	BLASA_2526	Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A); Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).	Amidase; Function of strongly homologous gene; enzyme; Belongs to the amidase family.	0.916