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fumC fumC icd icd acnB acnB gabD gabD prsA prsA sucC sucC sdhB sdhB AIE73810.1 AIE73810.1 merA merA pdhA pdhA AIE74143.1 AIE74143.1 nifJ nifJ sucD sucD citH citH phdD phdD hdrB hdrB AIE75376.1 AIE75376.1 odhB odhB pdhB pdhB gltA gltA sdhB-2 sdhB-2 frdA frdA me me
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fumCFumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (455 aa)
icdIsocitrate dehydrogenase [NADP]; Sly1003080. (475 aa)
acnBAconitate hydratase 2; Sly1002900; Belongs to the aconitase/IPM isomerase family. (868 aa)
gabDSuccinate-semialdehyde dehydrogenase [NAD]; Sly1025030. (454 aa)
prsARibose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. (319 aa)
sucCSuccinyl-CoA ligase [ADP-forming] beta chain; Sly3000600. (407 aa)
sdhBSuccinate dehydrogenase iron-sulfur protein; Sly1028580; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (245 aa)
AIE73810.1Hypothetical protein; Sly1025910. (590 aa)
merAMercuric ion reductase; Sly1026890. (514 aa)
pdhAPyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (342 aa)
AIE74143.1Hypothetical protein; Sly1023650. (393 aa)
nifJPyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin. (1193 aa)
sucDSuccinyl-CoA ligase [ADP-forming] alpha chain; Sly1017980. (292 aa)
citHMalate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. (336 aa)
phdDDihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex / Dihydrolipoamide dehydrogenase; Sly1016380. (474 aa)
hdrBPutative succinate dehydrogenase cytochrome b subunit; Sly1013730. (301 aa)
AIE75376.14Fe-4S ferredoxin, iron-sulfur binding; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (75 aa)
odhBDihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; Sly1006420. (437 aa)
pdhBPyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (324 aa)
gltACitrate synthase (si); Sly1021010; Belongs to the citrate synthase family. (394 aa)
sdhB-2Succinate dehydrogenase iron-sulfur protein; Sly1019560; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (331 aa)
frdASuccinate dehydrogenase flavoprotein subunit; Sly3000110. (575 aa)
meNADP-dependent malic enzyme; Sly1010700. (463 aa)
Your Current Organism:
Synechocystis sp. PCC6714
NCBI taxonomy Id: 1147
Other names: Aphanocapsa sp. (strain 5.3A), Aphanocapsa sp. 5-3A, Aphanocapsa sp. 5.3A, S. sp. PCC 6714, Synechocystis sp. (ATCC 27178), Synechocystis sp. (PCC 6714), Synechocystis sp. (strain PCC 6714), Synechocystis sp. ATCC 27178, Synechocystis sp. PCC 6714, Synechocystis sp. SAG 92.79, Synechocystis sp. UTCC 98, Synechocystis sp. UTEX 2470
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