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cobA/hemD cobA/hemD cobI cobI cobM cobM rsmI rsmI cobJ cobJ cbiE, cbiE, cobA cobA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cobA/hemDUroporphyrinogen-III methyltransferase / Uroporphyrinogen-III synthase; Sly1011940; Belongs to the precorrin methyltransferase family. (508 aa)
cobICobalt-precorrin-2 C20-methyltransferase; Sly1007800; Belongs to the precorrin methyltransferase family. (235 aa)
cobMCobalt-precorrin-4 C11-methyltransferase; Sly1020080. (264 aa)
rsmIrRNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. (276 aa)
cobJCobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase; Sly1017270. (615 aa)
cbiE,Precorrin-6Y C5,15-methyltransferase (decarboxylating); Sly1023310. (422 aa)
cobAUroporphyrinogen-III methyltransferase; Sly1029500; Belongs to the precorrin methyltransferase family. (258 aa)
Your Current Organism:
Synechocystis sp. PCC6714
NCBI taxonomy Id: 1147
Other names: Aphanocapsa sp. (strain 5.3A), Aphanocapsa sp. 5-3A, Aphanocapsa sp. 5.3A, S. sp. PCC 6714, Synechocystis sp. (ATCC 27178), Synechocystis sp. (PCC 6714), Synechocystis sp. (strain PCC 6714), Synechocystis sp. ATCC 27178, Synechocystis sp. PCC 6714, Synechocystis sp. SAG 92.79, Synechocystis sp. UTCC 98, Synechocystis sp. UTEX 2470
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