STRINGSTRING
rbcR, rbcR, sigE, sigE, lexA lexA AIE75945.1 AIE75945.1 AIE74291.1 AIE74291.1 sigD sigD AIE74374.1 AIE74374.1 AIE74396.1 AIE74396.1 ompR-2 ompR-2 hrcA hrcA AIE74631.1 AIE74631.1 AIE74702.1 AIE74702.1 rpaA, rpaA, AIE74830.1 AIE74830.1 sigC sigC sigH sigH ycf29 ycf29 AIE74955.1 AIE74955.1 AIE74958.1 AIE74958.1 AIE75079.1 AIE75079.1 sigI sigI ntcB ntcB AIE75890.1 AIE75890.1 AIE75349.1 AIE75349.1 fur fur sigB sigB ruvB ruvB AIE74265.1 AIE74265.1 AIE74219.1 AIE74219.1 AIE74215.1 AIE74215.1 AIE74068.1 AIE74068.1 AIE74001.1 AIE74001.1 ntcA, ntcA, sycrp2 sycrp2 sigG sigG sigA, sigA, AIE73567.1 AIE73567.1 AIE73522.1 AIE73522.1 AIE73514.1 AIE73514.1 cmpR cmpR AIE73403.1 AIE73403.1 AIE73391.1 AIE73391.1 AIE73162.1 AIE73162.1 AIE73062.1 AIE73062.1 AIE72812.2 AIE72812.2 arsA arsA ndhR ndhR ompR ompR rpaB, rpaB, AIE72751.1 AIE72751.1 AIE72657.1 AIE72657.1 AIE72566.1 AIE72566.1 fur-2 fur-2 AIE75634.1 AIE75634.1 AIE75661.1 AIE75661.1 sycrp1 sycrp1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rbcR,RuBisCO operon transcriptional regulator; Sly1008740; Belongs to the LysR transcriptional regulatory family. (338 aa)
sigE,Cyanobacteria-specific RpoD-like sigma factor, type-1; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (372 aa)
lexASOS-response repressor and protease LexA; Sly1019580; Belongs to the peptidase S24 family. (203 aa)
AIE75945.1Two-component response regulator; Sly1019540. (232 aa)
AIE74291.1Transcriptional regulator, LysR family; Sly1019030; Belongs to the LysR transcriptional regulatory family. (296 aa)
sigDCyanobacteria-specific RpoD-like sigma factor, type-2 / Group 2 RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (318 aa)
AIE74374.1Transcriptional regulator, HxlR family; Sly1018260. (137 aa)
AIE74396.1Nudix-related transcriptional regulator NrtR; Sly1018040. (239 aa)
ompR-2Regulatory protein; Sly1016720. (235 aa)
hrcAHeat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. (377 aa)
AIE74631.1Two-component response regulator; Sly1015740. (242 aa)
AIE74702.1Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. (162 aa)
rpaA,Two-component response regulator; Sly1014000. (241 aa)
AIE74830.1Hypothetical protein; Sly1013720. (95 aa)
sigCGroup 2 RNA polymerase sigma factor / Cyanobacteria-specific RpoD-like sigma factor, type-7; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (404 aa)
sigHRNA polymerase sigma factor RpoE; Sly1013380; Belongs to the sigma-70 factor family. ECF subfamily. (193 aa)
ycf29Two-component response regulator; Sly1012620. (241 aa)
AIE74955.1Hypothetical protein; Sly1012450. (79 aa)
AIE74958.1Hypothetical protein; Sly1012420. (257 aa)
AIE75079.1Phosphate regulon transcriptional regulatory protein PhoB (SphR); Sly1011180. (251 aa)
sigIRNA polymerase sigma-70 factor; Sly1009450; Belongs to the sigma-70 factor family. ECF subfamily. (185 aa)
ntcBNitrogen assimilation transcriptional activator NtcB; Sly1009170; Belongs to the LysR transcriptional regulatory family. (326 aa)
AIE75890.1Transcriptional regulator, MecI family; Sly1020090. (140 aa)
AIE75349.1Transcriptional regulator, LysR family; Sly1008030; Belongs to the LysR transcriptional regulatory family. (297 aa)
furFerric uptake regulation protein FUR; Sly1006700; Belongs to the Fur family. (165 aa)
sigBCyanobacteria-specific RpoD-like sigma factor, type-3 / Group 2 RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (328 aa)
ruvBHolliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (358 aa)
AIE74265.1Two-component response regulator; Sly1019280. (228 aa)
AIE74219.1Two-component response regulator; Sly1024410. (134 aa)
AIE74215.1Transcriptional regulator, FUR family; Sly1024370; Belongs to the Fur family. (139 aa)
AIE74068.1Hypothetical protein; Sly1022910. (111 aa)
AIE74001.1Hypothetical protein; Sly1022230. (59 aa)
ntcA,Global nitrogen regulatory protein, CRP family of transcriptional regulators; Sly1027290. (225 aa)
sycrp2Transcriptional regulator, Crp/Fnr family; Sly1025740. (241 aa)
sigGRNA polymerase sigma-70 factor; Sly1025430; Belongs to the sigma-70 factor family. ECF subfamily. (223 aa)
sigA,Group 2 RNA polymerase sigma factor / RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (456 aa)
AIE73567.1Transcriptional regulator, HxlR family; Sly1027810. (116 aa)
AIE73522.1Iron-sulfur cluster regulator SufR; Sly1028470. (219 aa)
AIE73514.1Rrf2 family transcriptional regulator; Sly1028560. (157 aa)
cmpRRuBisCO operon transcriptional regulator; Sly1029560; Belongs to the LysR transcriptional regulatory family. (304 aa)
AIE73403.1Hypothetical protein; Sly1029710. (108 aa)
AIE73391.1Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake; Sly1029830. (409 aa)
AIE73162.1Two-component response regulator; Sly2001620. (224 aa)
AIE73062.1Sly2002600. (205 aa)
AIE72812.2Transcriptional regulator, GntR family; Sly1001670. (343 aa)
arsATranscriptional regulator; Sly1001710. (104 aa)
ndhRRubisco operon transcriptional regulator; Sly1001780; Belongs to the LysR transcriptional regulatory family. (316 aa)
ompRNitrogen-responsive response regulator NrrA; Sly1001800. (250 aa)
rpaB,Transcriptional regulatory protein cpxR; Sly1002200. (243 aa)
AIE72751.1Transcriptional regulator; Sly1002260. (89 aa)
AIE72657.1Transcriptional regulator, LysR family; Sly1003180; Belongs to the LysR transcriptional regulatory family. (303 aa)
AIE72566.1Two-component response regulator; Sly1004060. (213 aa)
fur-2Zinc uptake regulation protein ZUR; Sly1005020; Belongs to the Fur family. (138 aa)
AIE75634.1OmpR subfamily; Sly1005210. (234 aa)
AIE75661.1Sly1004940. (189 aa)
sycrp1Transcriptional regulator, Crp/Fnr family; Sly1020410. (232 aa)
Your Current Organism:
Synechocystis sp. PCC6714
NCBI taxonomy Id: 1147
Other names: Aphanocapsa sp. (strain 5.3A), Aphanocapsa sp. 5-3A, Aphanocapsa sp. 5.3A, S. sp. PCC 6714, Synechocystis sp. (ATCC 27178), Synechocystis sp. (PCC 6714), Synechocystis sp. (strain PCC 6714), Synechocystis sp. ATCC 27178, Synechocystis sp. PCC 6714, Synechocystis sp. SAG 92.79, Synechocystis sp. UTCC 98, Synechocystis sp. UTEX 2470
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.