STRINGSTRING
natD natD AIE73397.1 AIE73397.1 livH livH natC natC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
natDHigh-affinity branched-chain amino acid transport system permease protein LivH; Sly1020940; Belongs to the binding-protein-dependent transport system permease family. (286 aa)
AIE73397.1Urea ABC transporter, permease protein UrtC; Sly1029770; Belongs to the binding-protein-dependent transport system permease family. (410 aa)
livHUrea ABC transporter, permease protein UrtB; Sly1029780; Belongs to the binding-protein-dependent transport system permease family. (388 aa)
natCBranched-chain amino acid transport system permease protein LivM; Sly1000280; Belongs to the binding-protein-dependent transport system permease family. (372 aa)
Your Current Organism:
Synechocystis sp. PCC6714
NCBI taxonomy Id: 1147
Other names: Aphanocapsa sp. (strain 5.3A), Aphanocapsa sp. 5-3A, Aphanocapsa sp. 5.3A, S. sp. PCC 6714, Synechocystis sp. (ATCC 27178), Synechocystis sp. (PCC 6714), Synechocystis sp. (strain PCC 6714), Synechocystis sp. ATCC 27178, Synechocystis sp. PCC 6714, Synechocystis sp. SAG 92.79, Synechocystis sp. UTCC 98, Synechocystis sp. UTEX 2470
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