STRINGSTRING
slr2015 slr2015 slr2016 slr2016 slr2017 slr2017 slr2018 slr2018 slr2019 slr2019 slr1168 slr1168 slr1682 slr1682 slr0019 slr0019 slr1667 slr1667 slr1668 slr1668
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
slr2015ORF_ID:slr2015; unknown protein. (380 aa)
slr2016ORF_ID:slr2016; unknown protein. (158 aa)
slr2017ORF_ID:slr2017; unknown protein. (360 aa)
slr2018ORF_ID:slr2018; unknown protein. (799 aa)
slr2019ABC transporter; ORF_ID:slr2019. (593 aa)
slr1168ORF_ID:slr1168; unknown protein. (103 aa)
slr1682Transposase; ORF_ID:slr1682. (135 aa)
slr0019ORF_ID:slr0019; unknown protein. (892 aa)
slr1667ORF_ID:slr1667; unknown protein. (178 aa)
slr1668ORF_ID:slr1668; unknown protein. (280 aa)
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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