STRINGSTRING
slr1302 slr1302 slr2006 slr2006 ndhD ndhD slr2008 slr2008 ndhF ndhF slr2010 slr2010 ssr3409 ssr3409 ssr3410 ssr3410 slr2011 slr2011 slr2012 slr2012 slr1512 slr1512 slr1513 slr1513 sll0834 sll0834
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
slr1302ORF_ID:slr1302; unknown protein. (409 aa)
slr2006ORF_ID:slr2006; hypothetical protein. (114 aa)
ndhDNADH dehydrogenase subunit 4; ORF_ID:slr2007. (487 aa)
slr2008ORF_ID:slr2008; hypothetical protein. (116 aa)
ndhFNADH dehydrogenase subunit 5; ORF_ID:slr2009. (495 aa)
slr2010ORF_ID:slr2010; unknown protein. (130 aa)
ssr3409ORF_ID:ssr3409; unknown protein. (97 aa)
ssr3410ORF_ID:ssr3410; unknown protein. (98 aa)
slr2011ORF_ID:slr2011; unknown protein. (199 aa)
slr2012ORF_ID:slr2012; unknown protein. (215 aa)
slr1512ORF_ID:slr1512; unknown protein. (374 aa)
slr1513ORF_ID:slr1513; unknown protein. (110 aa)
sll0834Low affinity sulfate transporter; ORF_ID:sll0834. (564 aa)
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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