Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| apcA | apcB | gene:10498743 | gene:10498744 | Allophycocyanin a chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 nanometers. | Allophycocyanin b chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 nanometers. | 0.996 |
| apcA | apcD | gene:10498743 | gene:10497745 | Allophycocyanin a chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 nanometers. | allophycocyanin-B; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 654 nanometers (By similarity). | 0.977 |
| apcA | apcE | gene:10498743 | gene:10499534 | Allophycocyanin a chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 nanometers. | Phycobilisome LCM core-membrane linker polypeptide; This protein is postulated to act both as terminal energy acceptor (by its phycobilin-like domains) and as a linker polypeptide (by its repeats and arms) that stabilizes the phycobilisome core architecture. Has intrinsic bilin lyase activity (By similarity). | 0.993 |
| apcA | apcF | gene:10498743 | gene:10500424 | Allophycocyanin a chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 nanometers. | Phycobilisome core component; A variant beta-allophycocyanin (AP) which forms a complex with ApcE, a phycobilisome terminal emitter that influences energy transfer to photosystem II. | 0.989 |
| apcA | cpcA | gene:10498743 | gene:10498094 | Allophycocyanin a chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 nanometers. | Phycocyanin a subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | 0.999 |
| apcA | cpcB | gene:10498743 | gene:10498095 | Allophycocyanin a chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 nanometers. | Phycocyanin b subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | 0.999 |
| apcB | apcA | gene:10498744 | gene:10498743 | Allophycocyanin b chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 nanometers. | Allophycocyanin a chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 nanometers. | 0.996 |
| apcB | apcD | gene:10498744 | gene:10497745 | Allophycocyanin b chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 nanometers. | allophycocyanin-B; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 654 nanometers (By similarity). | 0.992 |
| apcB | apcE | gene:10498744 | gene:10499534 | Allophycocyanin b chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 nanometers. | Phycobilisome LCM core-membrane linker polypeptide; This protein is postulated to act both as terminal energy acceptor (by its phycobilin-like domains) and as a linker polypeptide (by its repeats and arms) that stabilizes the phycobilisome core architecture. Has intrinsic bilin lyase activity (By similarity). | 0.993 |
| apcB | apcF | gene:10498744 | gene:10500424 | Allophycocyanin b chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 nanometers. | Phycobilisome core component; A variant beta-allophycocyanin (AP) which forms a complex with ApcE, a phycobilisome terminal emitter that influences energy transfer to photosystem II. | 0.987 |
| apcB | cpcA | gene:10498744 | gene:10498094 | Allophycocyanin b chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 nanometers. | Phycocyanin a subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | 0.946 |
| apcB | cpcB | gene:10498744 | gene:10498095 | Allophycocyanin b chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 nanometers. | Phycocyanin b subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | 0.919 |
| apcB | slr0149 | gene:10498744 | gene:10499431 | Allophycocyanin b chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 nanometers. | ORF_ID:slr0149; unknown protein. | 0.737 |
| apcD | apcA | gene:10497745 | gene:10498743 | allophycocyanin-B; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 654 nanometers (By similarity). | Allophycocyanin a chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 nanometers. | 0.977 |
| apcD | apcB | gene:10497745 | gene:10498744 | allophycocyanin-B; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 654 nanometers (By similarity). | Allophycocyanin b chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 nanometers. | 0.992 |
| apcD | apcE | gene:10497745 | gene:10499534 | allophycocyanin-B; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 654 nanometers (By similarity). | Phycobilisome LCM core-membrane linker polypeptide; This protein is postulated to act both as terminal energy acceptor (by its phycobilin-like domains) and as a linker polypeptide (by its repeats and arms) that stabilizes the phycobilisome core architecture. Has intrinsic bilin lyase activity (By similarity). | 0.999 |
| apcD | apcF | gene:10497745 | gene:10500424 | allophycocyanin-B; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 654 nanometers (By similarity). | Phycobilisome core component; A variant beta-allophycocyanin (AP) which forms a complex with ApcE, a phycobilisome terminal emitter that influences energy transfer to photosystem II. | 0.989 |
| apcD | cpcA | gene:10497745 | gene:10498094 | allophycocyanin-B; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 654 nanometers (By similarity). | Phycocyanin a subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | 0.911 |
| apcD | cpcB | gene:10497745 | gene:10498095 | allophycocyanin-B; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 654 nanometers (By similarity). | Phycocyanin b subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | 0.900 |
| apcE | apcA | gene:10499534 | gene:10498743 | Phycobilisome LCM core-membrane linker polypeptide; This protein is postulated to act both as terminal energy acceptor (by its phycobilin-like domains) and as a linker polypeptide (by its repeats and arms) that stabilizes the phycobilisome core architecture. Has intrinsic bilin lyase activity (By similarity). | Allophycocyanin a chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 nanometers. | 0.993 |
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