STRINGSTRING
petF-4 petF-4 ssr1041 ssr1041 sdhB-2 sdhB-2 petF-3 petF-3 slr0148 slr0148 ssl3044 ssl3044 petF-2 petF-2 petF petF ssl2559 ssl2559
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
petF-4Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (97 aa)
ssr1041Ssr1041 protein; NAD-reducing hydrogenase gamma subunit homologue; ORF_ID:ssr1041. (79 aa)
sdhB-2Succinate dehydrogenase iron-sulfur protein; ORF_ID:sll0823; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (245 aa)
petF-3Ferredoxin; ORF_ID:slr0150. (103 aa)
slr0148Ferredoxin; ORF_ID:slr0148. (186 aa)
ssl3044Hydrogenase component; ORF_ID:ssl3044. (99 aa)
petF-2Ferredoxin; ORF_ID:sll1382. (122 aa)
petFFerredoxin; ORF_ID:slr1828. (106 aa)
ssl2559Ferredoxin; ORF_ID:ssl2559. (98 aa)
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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