Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AT103 | hemN-2 | gene:10499093 | gene:10499091 | Phytochrome-regulated gene; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family. | Oxygen independent coprophorphyrinogen III oxidase; Involved in the heme and chlorophyll biosynthesis. Catalyzes the anaerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen III to yield the vinyl groups in protoporphyrinogen IX; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.895 |
| AT103 | ho2 | gene:10499093 | gene:10499092 | Phytochrome-regulated gene; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family. | Heme oxygenase; Catalyzes the opening of the heme ring with the release of iron. Key enzyme in the synthesis of the chromophoric part of the photosynthetic antennae. | 0.926 |
| AT103 | sll1214 | gene:10499093 | gene:10497438 | Phytochrome-regulated gene; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family. | Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 1; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family. | 0.905 |
| atp1 | atpA | gene:10497596 | gene:10497590 | ATP synthase protein I; A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex; Belongs to the bacterial AtpI family. | ATP synthase a subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | 0.952 |
| atp1 | slr0086 | gene:10497596 | gene:10500064 | ATP synthase protein I; A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex; Belongs to the bacterial AtpI family. | ORF_ID:slr0086; unknown protein; Belongs to the heat shock protein 70 family. | 0.533 |
| atpA | atp1 | gene:10497590 | gene:10497596 | ATP synthase a subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | ATP synthase protein I; A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex; Belongs to the bacterial AtpI family. | 0.952 |
| dnaK | dnaK-2 | gene:10497984 | gene:10499551 | DnaK protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | DnaK protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.902 |
| dnaK | dnaK-3 | gene:10497984 | gene:10499790 | DnaK protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | DnaK protein; Acts as a chaperone. | 0.905 |
| dnaK | sll0909 | gene:10497984 | gene:10499292 | DnaK protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | ORF_ID:sll0909; unknown protein. | 0.692 |
| dnaK-2 | dnaK | gene:10499551 | gene:10497984 | DnaK protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | DnaK protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.902 |
| dnaK-2 | dnaK-3 | gene:10499551 | gene:10499790 | DnaK protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | DnaK protein; Acts as a chaperone. | 0.904 |
| dnaK-2 | sll0909 | gene:10499551 | gene:10499292 | DnaK protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | ORF_ID:sll0909; unknown protein. | 0.559 |
| dnaK-3 | dnaK | gene:10499790 | gene:10497984 | DnaK protein; Acts as a chaperone. | DnaK protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.905 |
| dnaK-3 | dnaK-2 | gene:10499790 | gene:10499551 | DnaK protein; Acts as a chaperone. | DnaK protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.904 |
| dnaK-3 | sll0909 | gene:10499790 | gene:10499292 | DnaK protein; Acts as a chaperone. | ORF_ID:sll0909; unknown protein. | 0.691 |
| hemN-2 | AT103 | gene:10499091 | gene:10499093 | Oxygen independent coprophorphyrinogen III oxidase; Involved in the heme and chlorophyll biosynthesis. Catalyzes the anaerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen III to yield the vinyl groups in protoporphyrinogen IX; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Phytochrome-regulated gene; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family. | 0.895 |
| hemN-2 | ho1 | gene:10499091 | gene:10497722 | Oxygen independent coprophorphyrinogen III oxidase; Involved in the heme and chlorophyll biosynthesis. Catalyzes the anaerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen III to yield the vinyl groups in protoporphyrinogen IX; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Heme oxygenase; Catalyzes the opening of the heme ring with the release of iron. Key enzyme in the synthesis of the chromophoric part of the photosynthetic antennae. | 0.678 |
| hemN-2 | ho2 | gene:10499091 | gene:10499092 | Oxygen independent coprophorphyrinogen III oxidase; Involved in the heme and chlorophyll biosynthesis. Catalyzes the anaerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen III to yield the vinyl groups in protoporphyrinogen IX; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Heme oxygenase; Catalyzes the opening of the heme ring with the release of iron. Key enzyme in the synthesis of the chromophoric part of the photosynthetic antennae. | 0.942 |
| ho1 | hemN-2 | gene:10497722 | gene:10499091 | Heme oxygenase; Catalyzes the opening of the heme ring with the release of iron. Key enzyme in the synthesis of the chromophoric part of the photosynthetic antennae. | Oxygen independent coprophorphyrinogen III oxidase; Involved in the heme and chlorophyll biosynthesis. Catalyzes the anaerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen III to yield the vinyl groups in protoporphyrinogen IX; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.678 |
| ho1 | ho2 | gene:10497722 | gene:10499092 | Heme oxygenase; Catalyzes the opening of the heme ring with the release of iron. Key enzyme in the synthesis of the chromophoric part of the photosynthetic antennae. | Heme oxygenase; Catalyzes the opening of the heme ring with the release of iron. Key enzyme in the synthesis of the chromophoric part of the photosynthetic antennae. | 0.909 |
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