Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cpcA | psbA2 | gene:10498094 | gene:10497441 | Phycocyanin a subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | Photosystem II D1 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. | 0.402 |
| cpcA | sll0998 | gene:10498094 | gene:10498010 | Phycocyanin a subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | LysR transcriptional regulator; Trans-acting transcriptional regulator of RuBisCO genes (rbcL and rbcS) expression. | 0.431 |
| cpcA | slr0947 | gene:10498094 | gene:10499284 | Phycocyanin a subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | OmpR subfamily; ORF_ID:slr0947. | 0.413 |
| fbp-2 | glgP | gene:10499294 | gene:10498416 | Fructose 1,6-bisphosphatase; ORF_ID:slr0952; gene:fbp or fdp. | Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (By similarity). | 0.445 |
| fbp-2 | glgP-2 | gene:10499294 | gene:10498453 | Fructose 1,6-bisphosphatase; ORF_ID:slr0952; gene:fbp or fdp. | Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.444 |
| fbp-2 | rbcS | gene:10499294 | gene:10499689 | Fructose 1,6-bisphosphatase; ORF_ID:slr0952; gene:fbp or fdp. | Ribulose bisphosphate carboxylase small subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (By similarity); Belongs to the RuBisCO small chain family. | 0.691 |
| glgP | fbp-2 | gene:10498416 | gene:10499294 | Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (By similarity). | Fructose 1,6-bisphosphatase; ORF_ID:slr0952; gene:fbp or fdp. | 0.445 |
| glgP | glgP-2 | gene:10498416 | gene:10498453 | Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (By similarity). | Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.902 |
| glgP-2 | fbp-2 | gene:10498453 | gene:10499294 | Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Fructose 1,6-bisphosphatase; ORF_ID:slr0952; gene:fbp or fdp. | 0.444 |
| glgP-2 | glgP | gene:10498453 | gene:10498416 | Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (By similarity). | 0.902 |
| psbA2 | cpcA | gene:10497441 | gene:10498094 | Photosystem II D1 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. | Phycocyanin a subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. | 0.402 |
| psbA2 | pys | gene:10497441 | gene:10498716 | Photosystem II D1 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. | Phytoene synthase; Involved in the biosynthesis of carotenoids. Catalyzes the condensation of two molecules of geranylgeranyl diphosphate (GGPP) to give prephytoene diphosphate (PPPP) and the subsequent rearrangement of the cyclopropylcarbinyl intermediate to yield 15-cis-phytoene. | 0.408 |
| psbA2 | rbcS | gene:10497441 | gene:10499689 | Photosystem II D1 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. | Ribulose bisphosphate carboxylase small subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (By similarity); Belongs to the RuBisCO small chain family. | 0.404 |
| pys | psbA2 | gene:10498716 | gene:10497441 | Phytoene synthase; Involved in the biosynthesis of carotenoids. Catalyzes the condensation of two molecules of geranylgeranyl diphosphate (GGPP) to give prephytoene diphosphate (PPPP) and the subsequent rearrangement of the cyclopropylcarbinyl intermediate to yield 15-cis-phytoene. | Photosystem II D1 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. | 0.408 |
| pys | sll1556 | gene:10498716 | gene:10499257 | Phytoene synthase; Involved in the biosynthesis of carotenoids. Catalyzes the condensation of two molecules of geranylgeranyl diphosphate (GGPP) to give prephytoene diphosphate (PPPP) and the subsequent rearrangement of the cyclopropylcarbinyl intermediate to yield 15-cis-phytoene. | Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.642 |
| rbcR | rbcS | gene:10498793 | gene:10499689 | Rubisco operon transcriptional regulator; ORF_ID:sll1594; Belongs to the LysR transcriptional regulatory family. | Ribulose bisphosphate carboxylase small subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (By similarity); Belongs to the RuBisCO small chain family. | 0.712 |
| rbcR | slr0947 | gene:10498793 | gene:10499284 | Rubisco operon transcriptional regulator; ORF_ID:sll1594; Belongs to the LysR transcriptional regulatory family. | OmpR subfamily; ORF_ID:slr0947. | 0.545 |
| rbcS | fbp-2 | gene:10499689 | gene:10499294 | Ribulose bisphosphate carboxylase small subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (By similarity); Belongs to the RuBisCO small chain family. | Fructose 1,6-bisphosphatase; ORF_ID:slr0952; gene:fbp or fdp. | 0.691 |
| rbcS | psbA2 | gene:10499689 | gene:10497441 | Ribulose bisphosphate carboxylase small subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (By similarity); Belongs to the RuBisCO small chain family. | Photosystem II D1 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. | 0.404 |
| rbcS | rbcR | gene:10499689 | gene:10498793 | Ribulose bisphosphate carboxylase small subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (By similarity); Belongs to the RuBisCO small chain family. | Rubisco operon transcriptional regulator; ORF_ID:sll1594; Belongs to the LysR transcriptional regulatory family. | 0.712 |
page 1 of 2