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apcD apcD cpcG cpcG cpcC cpcC cpcC2 cpcC2 cpcA cpcA cpcB cpcB petJ petJ narB narB trpD trpD psbC psbC psbD psbD ntcB ntcB petE petE nirA nirA cpcG-2 cpcG-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
apcDallophycocyanin-B; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 654 nanometers (By similarity). (161 aa)
cpcGPhycobilisome rod-core linker polypeptide; ORF_ID:slr2051; Belongs to the phycobilisome linker protein family. (235 aa)
cpcCPhycocyanin associated linker protein; Rod linker protein, associated with phycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer. (291 aa)
cpcC2Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod 2; Rod linker protein, associated with phycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer. (273 aa)
cpcAPhycocyanin a subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. (162 aa)
cpcBPhycocyanin b subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. (172 aa)
petJCytochrome c553; Functions as an electron carrier between membrane-bound cytochrome b6-f and photosystem I in oxygenic photosynthesis. (120 aa)
narBNitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. (714 aa)
trpDAnthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). (348 aa)
psbCPhotosystem II CP43 protein; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation (By similarity). Required for correct assembly of PSII. (460 aa)
psbDPhotosystem II D2 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex. (352 aa)
ntcBTranscriptional activator protein; Seems to regulate utilization of fixed nitrogen by controlling the expression of a certain gene(s) involved in nitrogen metabolism. (309 aa)
petEPlastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I; Belongs to the plastocyanin family. (126 aa)
nirAFerredoxin--nitrite reductase; ORF_ID:slr0898; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (502 aa)
cpcG-2Phycobilisome rod-core linker polypeptide; ORF_ID:sll1471; Belongs to the phycobilisome linker protein family. (249 aa)
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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