7 items (Pararhodospirillum photometricum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CCG07101.1	Penicillin-binding protein 1A. (653 aa)
	CCG07929.1	Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family. (413 aa)
	mltG	Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. (329 aa)
	CCG08135.1	Peptidase M23B. (519 aa)
	CCG08690.1	Peptidase M23B. (448 aa)
	CCG08692.1	C-terminal processing peptidase S41A; Belongs to the peptidase S41A family. (441 aa)
	CCG09218.1	Penicillin-binding protein 1A. (846 aa)

Your Current Organism:

Pararhodospirillum photometricum

NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCG07101.1	CCG07929.1	RSPPHO_00475	RSPPHO_01303	Penicillin-binding protein 1A.	Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.	0.914
CCG07101.1	CCG08135.1	RSPPHO_00475	RSPPHO_01509	Penicillin-binding protein 1A.	Peptidase M23B.	0.588
CCG07101.1	CCG08690.1	RSPPHO_00475	RSPPHO_02064	Penicillin-binding protein 1A.	Peptidase M23B.	0.459
CCG07101.1	CCG09218.1	RSPPHO_00475	RSPPHO_02592	Penicillin-binding protein 1A.	Penicillin-binding protein 1A.	0.955
CCG07101.1	mltG	RSPPHO_00475	RSPPHO_01364	Penicillin-binding protein 1A.	Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.	0.692
CCG07929.1	CCG07101.1	RSPPHO_01303	RSPPHO_00475	Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.	Penicillin-binding protein 1A.	0.914
CCG07929.1	CCG09218.1	RSPPHO_01303	RSPPHO_02592	Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.	Penicillin-binding protein 1A.	0.910
CCG08135.1	CCG07101.1	RSPPHO_01509	RSPPHO_00475	Peptidase M23B.	Penicillin-binding protein 1A.	0.588
CCG08135.1	CCG08690.1	RSPPHO_01509	RSPPHO_02064	Peptidase M23B.	Peptidase M23B.	0.722
CCG08135.1	CCG09218.1	RSPPHO_01509	RSPPHO_02592	Peptidase M23B.	Penicillin-binding protein 1A.	0.635
CCG08690.1	CCG07101.1	RSPPHO_02064	RSPPHO_00475	Peptidase M23B.	Penicillin-binding protein 1A.	0.459
CCG08690.1	CCG08135.1	RSPPHO_02064	RSPPHO_01509	Peptidase M23B.	Peptidase M23B.	0.722
CCG08690.1	CCG08692.1	RSPPHO_02064	RSPPHO_02066	Peptidase M23B.	C-terminal processing peptidase S41A; Belongs to the peptidase S41A family.	0.921
CCG08690.1	CCG09218.1	RSPPHO_02064	RSPPHO_02592	Peptidase M23B.	Penicillin-binding protein 1A.	0.410
CCG08692.1	CCG08690.1	RSPPHO_02066	RSPPHO_02064	C-terminal processing peptidase S41A; Belongs to the peptidase S41A family.	Peptidase M23B.	0.921
CCG08692.1	mltG	RSPPHO_02066	RSPPHO_01364	C-terminal processing peptidase S41A; Belongs to the peptidase S41A family.	Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.	0.429
CCG09218.1	CCG07101.1	RSPPHO_02592	RSPPHO_00475	Penicillin-binding protein 1A.	Penicillin-binding protein 1A.	0.955
CCG09218.1	CCG07929.1	RSPPHO_02592	RSPPHO_01303	Penicillin-binding protein 1A.	Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.	0.910
CCG09218.1	CCG08135.1	RSPPHO_02592	RSPPHO_01509	Penicillin-binding protein 1A.	Peptidase M23B.	0.635
CCG09218.1	CCG08690.1	RSPPHO_02592	RSPPHO_02064	Penicillin-binding protein 1A.	Peptidase M23B.	0.410