STRINGSTRING
CCG09085.1 CCG09085.1 CCG06685.1 CCG06685.1 CCG06803.1 CCG06803.1 CCG08140.1 CCG08140.1 CCG08266.1 CCG08266.1 CCG08389.1 CCG08389.1 ruvA ruvA rplU rplU CCG08662.1 CCG08662.1 CCG09056.1 CCG09056.1 CCG09181.1 CCG09181.1 CCG09525.1 CCG09525.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CCG09085.1ATP-dependent DNA helicase RecG. (708 aa)
CCG06685.1ATP-dependent DNA helicase, Rep family. (747 aa)
CCG06803.1Transcriptional regulator, MucR family. (141 aa)
CCG08140.1ATP-dependent DNA helicase RecQ. (676 aa)
CCG08266.1Superfamily II DNA helicase. (757 aa)
CCG08389.1Putative uncharacterized protein. (251 aa)
ruvAHolliday junction ATP-dependent DNA helicase ruvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (232 aa)
rplU50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (100 aa)
CCG08662.1Transcriptional regulator, MucR family. (148 aa)
CCG09056.1Superfamily I DNA and RNA helicase. (606 aa)
CCG09181.1Rubrerythrin. (167 aa)
CCG09525.1Putative uncharacterized protein. (140 aa)
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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