STRINGSTRING
CCG09656.1 CCG09656.1 CCG06889.1 CCG06889.1 CCG07108.1 CCG07108.1 CCG07324.1 CCG07324.1 CCG07393.1 CCG07393.1 CCG07844.1 CCG07844.1 CCG07980.1 CCG07980.1 CCG08504.1 CCG08504.1 ntrC ntrC CCG08895.1 CCG08895.1 nifA nifA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CCG09656.1Transcriptional regulator, NifA subfamily, Fis family. (760 aa)
CCG06889.1Sigma-54 factor interaction domain-containing protein; Unnamed protein product. (357 aa)
CCG07108.1Transcriptional regulator, NifA subfamily, Fis family. (541 aa)
CCG07324.1Two component, sigma54 specific, transcriptional regulator, Fis family. (471 aa)
CCG07393.1Transcriptional regulator, NifA subfamily, Fis family. (543 aa)
CCG07844.1Two component, sigma54 specific, transcriptional regulator, Fis family. (462 aa)
CCG07980.1Sigma54 Specific Transcriptional Regulator containing GAF, and Fis DNA-binding domains. (648 aa)
CCG08504.1Two component, sigma54 specific, transcriptional regulator, Fis family. (490 aa)
ntrCNtrC protein; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (484 aa)
CCG08895.1Two component, sigma54 specific, transcriptional regulator, Fis family. (532 aa)
nifATranscriptional activator NifA. (603 aa)
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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