(17 nodes) HPT domain superfamily network (Pararhodospirillum photometricum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CCG07185.1	CheA Signal Transduction Histidine Kinases (STHK). (859 aa)
	CCG07768.1	Sensor protein. (437 aa)
	CCG08277.1	Sensor protein. (1680 aa)
	CCG08488.1	Signal transduction histidine kinase-like protein. (198 aa)
	CCG08577.1	Sensor protein. (260 aa)
	CCG08701.1	Response regulator receiver modulated diguanylate cyclase. (558 aa)
	CCG08758.1	Sensor protein. (900 aa)
	CCG09263.1	Sensor protein. (725 aa)
	CCG09364.1	Sensor protein. (1388 aa)
	CCG09501.1	Sensor protein. (1019 aa)
	CCG08429.1	Sensor protein. (1049 aa)
	CCG08428.1	Sensor protein. (836 aa)
	CCG06665.1	Sensor protein. (1016 aa)
	CCG06740.1	CheA Signal Transduction Histidine Kinases (STHK). (940 aa)
	CCG07087.1	CheA Signal Transduction Histidine Kinases (STHK). (698 aa)
	CCG07611.1	Gliding motility regulatory protein. (720 aa)
	CCG07613.1	Response regulator containing a CheY-like receiver domain and a GGDEF domain. (656 aa)

Your Current Organism:

Pararhodospirillum photometricum

NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCG06665.1	CCG06740.1	RSPPHO_00039	RSPPHO_00114	Sensor protein.	CheA Signal Transduction Histidine Kinases (STHK).	0.964
CCG06665.1	CCG07087.1	RSPPHO_00039	RSPPHO_00461	Sensor protein.	CheA Signal Transduction Histidine Kinases (STHK).	0.646
CCG06665.1	CCG07185.1	RSPPHO_00039	RSPPHO_00559	Sensor protein.	CheA Signal Transduction Histidine Kinases (STHK).	0.646
CCG06665.1	CCG07611.1	RSPPHO_00039	RSPPHO_00985	Sensor protein.	Gliding motility regulatory protein.	0.980
CCG06665.1	CCG07613.1	RSPPHO_00039	RSPPHO_00987	Sensor protein.	Response regulator containing a CheY-like receiver domain and a GGDEF domain.	0.976
CCG06665.1	CCG07768.1	RSPPHO_00039	RSPPHO_01142	Sensor protein.	Sensor protein.	0.646
CCG06665.1	CCG08277.1	RSPPHO_00039	RSPPHO_01651	Sensor protein.	Sensor protein.	0.985
CCG06665.1	CCG08428.1	RSPPHO_00039	RSPPHO_01802	Sensor protein.	Sensor protein.	0.973
CCG06665.1	CCG08429.1	RSPPHO_00039	RSPPHO_01803	Sensor protein.	Sensor protein.	0.948
CCG06665.1	CCG08577.1	RSPPHO_00039	RSPPHO_01951	Sensor protein.	Sensor protein.	0.950
CCG06665.1	CCG08701.1	RSPPHO_00039	RSPPHO_02075	Sensor protein.	Response regulator receiver modulated diguanylate cyclase.	0.925
CCG06665.1	CCG08758.1	RSPPHO_00039	RSPPHO_02132	Sensor protein.	Sensor protein.	0.947
CCG06665.1	CCG09263.1	RSPPHO_00039	RSPPHO_02637	Sensor protein.	Sensor protein.	0.973
CCG06665.1	CCG09364.1	RSPPHO_00039	RSPPHO_02738	Sensor protein.	Sensor protein.	0.984
CCG06665.1	CCG09501.1	RSPPHO_00039	RSPPHO_02875	Sensor protein.	Sensor protein.	0.985
CCG06740.1	CCG06665.1	RSPPHO_00114	RSPPHO_00039	CheA Signal Transduction Histidine Kinases (STHK).	Sensor protein.	0.964
CCG06740.1	CCG07087.1	RSPPHO_00114	RSPPHO_00461	CheA Signal Transduction Histidine Kinases (STHK).	CheA Signal Transduction Histidine Kinases (STHK).	0.956
CCG06740.1	CCG07185.1	RSPPHO_00114	RSPPHO_00559	CheA Signal Transduction Histidine Kinases (STHK).	CheA Signal Transduction Histidine Kinases (STHK).	0.960
CCG06740.1	CCG07611.1	RSPPHO_00114	RSPPHO_00985	CheA Signal Transduction Histidine Kinases (STHK).	Gliding motility regulatory protein.	0.953
CCG06740.1	CCG07613.1	RSPPHO_00114	RSPPHO_00987	CheA Signal Transduction Histidine Kinases (STHK).	Response regulator containing a CheY-like receiver domain and a GGDEF domain.	0.945