(46 nodes) Mismatch repair network (Moesziomyces antarcticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PANT_3d00053	Mitochondrial polypeptide chain release factor. (500 aa)
	PANT_5c00064	Zds_C domain-containing protein. (1978 aa)
	PANT_7c00162	Uncharacterized protein. (542 aa)
	PANT_8d00074	DNA mismatch repair protein-MLH3 family. (360 aa)
	PANT_9c00259	Mismatch repair ATPase MSH5. (894 aa)
	PANT_14d00098	5'-3' exonuclease. (730 aa)
	PANT_15c00019	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (285 aa)
	PANT_22d00011	DNA polymerase. (1160 aa)
	PANT_2d00035	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (606 aa)
	PANT_2d00060	DNA_mis_repair domain-containing protein. (726 aa)
	PANT_27c00067	Replication factor C, subunit RFC5. (342 aa)
	PANT_27d00090	DNA_LIGASE_A3 domain-containing protein. (1004 aa)
	PANT_6c00055	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (227 aa)
	PANT_7d00025	DNA_MISMATCH_REPAIR_2 domain-containing protein. (973 aa)
	PANT_9c00290	Uncharacterized protein. (168 aa)
	PANT_9c00394	Replication factor C, subunit RFC2. (374 aa)
	PANT_10c00050	Uncharacterized protein. (556 aa)
	PANT_14c00015	Mismatch repair ATPase MSH6. (2956 aa)
	PANT_3d00094	Ca2+ transporting ATPase. (143 aa)
	PANT_15d00028	Vezatin domain-containing protein. (1367 aa)
	PANT_5d00116	Uncharacterized protein. (249 aa)
	PANT_7d00022	DNA ligase. (828 aa)
	PANT_19d00052	MutS_I domain-containing protein. (169 aa)
	PANT_7d00176	Uncharacterized protein. (729 aa)
	PANT_22c00118	Uncharacterized protein. (1146 aa)
	PANT_22d00117	Uncharacterized protein. (570 aa)
	PANT_24c00040	Replication factor C, subunit RFC1. (837 aa)
	PANT_26c00027	Uncharacterized protein. (449 aa)
	PANT_13c00108	Uncharacterized conserved protein. (198 aa)
	PANT_16c00048	Chromo domain-containing protein. (578 aa)
	PANT_19d00053	Mismatch repair ATPase MSH2. (726 aa)
	PANT_19c00060	Uncharacterized protein. (853 aa)
	PANT_22d00250	DNA mismatch repair protein-MLH2/PMS1/Pms2 family. (915 aa)
	PANT_3d00054	Uncharacterized conserved protein. (305 aa)
	PANT_1d00006	Pyruvate kinase. (1038 aa)
	PANT_9c00129	Replication factor C, subunit RFC4. (383 aa)
	PANT_12c00018	3'-5' exonuclease. (384 aa)
	PANT_7c00310	Replication factor C, subunit RFC3. (1296 aa)
	PANT_8d00100	Replication factor C subunit 1. (953 aa)
	PANT_18d00017	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1112 aa)
	PANT_18d00083	Uncharacterized protein. (114 aa)
	PANT_10d00064	3'-5' DNA helicase. (1122 aa)
	PANT_22c00074	Uncharacterized protein. (493 aa)
	PANT_22d00124	3'-5' DNA helicase. (1167 aa)
	PANT_22d00175	Uncharacterized protein. (839 aa)
	PANT_19d00013	Amino_oxidase domain-containing protein. (502 aa)

Your Current Organism:

Moesziomyces antarcticus

NCBI taxonomy Id: 1151754
Other names: M. antarcticus T-34, Moesziomyces antarcticus T-34, Pseudozyma antarctica T-34

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PANT_10c00050	PANT_14d00098	M9LVX8	M9LR05	Uncharacterized protein.	5'-3' exonuclease.	0.659
PANT_10c00050	PANT_15c00019	M9LVX8	M9LR35	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.904
PANT_10c00050	PANT_15d00028	M9LVX8	M9LXK7	Uncharacterized protein.	Vezatin domain-containing protein.	0.904
PANT_10c00050	PANT_19c00060	M9LVX8	M9M5X3	Uncharacterized protein.	Uncharacterized protein.	0.577
PANT_10c00050	PANT_19d00052	M9LVX8	M9LYR4	Uncharacterized protein.	MutS_I domain-containing protein.	0.426
PANT_10c00050	PANT_19d00053	M9LVX8	M9M5V7	Uncharacterized protein.	Mismatch repair ATPase MSH2.	0.426
PANT_10c00050	PANT_22d00011	M9LVX8	M9LS82	Uncharacterized protein.	DNA polymerase.	0.993
PANT_10c00050	PANT_22d00124	M9LVX8	M9MG14	Uncharacterized protein.	3'-5' DNA helicase.	0.711
PANT_10c00050	PANT_24c00040	M9LVX8	M9M0N0	Uncharacterized protein.	Replication factor C, subunit RFC1.	0.609
PANT_10c00050	PANT_27c00067	M9LVX8	M9LTF2	Uncharacterized protein.	Replication factor C, subunit RFC5.	0.614
PANT_10c00050	PANT_2d00035	M9LVX8	M9LSP3	Uncharacterized protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.577
PANT_10c00050	PANT_3d00053	M9LVX8	M9LJH2	Uncharacterized protein.	Mitochondrial polypeptide chain release factor.	0.995
PANT_10c00050	PANT_5d00116	M9LVX8	M9LY08	Uncharacterized protein.	Uncharacterized protein.	0.600
PANT_10c00050	PANT_7c00310	M9LVX8	M9MDT4	Uncharacterized protein.	Replication factor C, subunit RFC3.	0.588
PANT_10c00050	PANT_8d00100	M9LVX8	M9ME59	Uncharacterized protein.	Replication factor C subunit 1.	0.584
PANT_10c00050	PANT_9c00129	M9LVX8	M9MCD4	Uncharacterized protein.	Replication factor C, subunit RFC4.	0.598
PANT_10c00050	PANT_9c00290	M9LVX8	M9LVG1	Uncharacterized protein.	Uncharacterized protein.	0.783
PANT_10c00050	PANT_9c00394	M9LVX8	M9LVN7	Uncharacterized protein.	Replication factor C, subunit RFC2.	0.617
PANT_10d00064	PANT_12c00018	M9MFC1	M9MDL9	3'-5' DNA helicase.	3'-5' exonuclease.	0.507
PANT_10d00064	PANT_14d00098	M9MFC1	M9LR05	3'-5' DNA helicase.	5'-3' exonuclease.	0.551