STRINGSTRING
xynD3 xynD3 sacC sacC iolA iolA iolB iolB iolC iolC iolD iolD iolE iolE iolG iolG fbaB fbaB deoC deoC yxiA yxiA pelB pelB galE3 galE3 ydhT ydhT ydhR ydhR ydhP ydhP fbaA fbaA ywlF ywlF xynA xynA rbsD rbsD rbsK rbsK yvdK yvdK malL malL gntK gntK gapA gapA pgk pgk tpiA tpiA pgm3 pgm3 eno eno pgi pgi yugT yugT ytkL ytkL pfkA pfkA pykA pykA abnA abnA araA araA araB araB araD araD abfA abfA xsa xsa BANAU_2579 BANAU_2579 glcK glcK lpdA lpdA bkdB bkdB gnd gnd bglA bglA odhA odhA yocA yocA yoeD yoeD yoxA yoxA ynfF ynfF bglC bglC xylB xylB xynB xynB rpe rpe pdhD pdhD pdhC pdhC pdhB pdhB pdhA pdhA ydhD ydhD uxaA uxaA uxaB uxaB lacG lacG yisS yisS glpD glpD glpK glpK acoL acoL treA treA pel pel yckE yckE cah cah ldh ldh ycdG ycdG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
xynD3Carbohydrate binding family 6; Belongs to the glycosyl hydrolase 43 family. (511 aa)
sacCLevanase; Belongs to the glycosyl hydrolase 32 family. (514 aa)
iolAMethylmalonate-semialdehyde dehydrogenase IolA; Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively. (487 aa)
iolB5-deoxy-glucuronate isomerase; Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D-gluconate). (271 aa)
iolC5-dehydro-2-deoxygluconokinase; Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5-dehydro-2- deoxy-D-gluconate (DKGP). (330 aa)
iolD3D-(3,5/4)-trihydroxycyclohexane-1, 2-dionehydrolase; Involved in the cleavage of the C1-C2 bond of 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy-glucuronate (5DG). (637 aa)
iolE2-keto-myo-inositol dehydratase; Catalyzes the dehydration of inosose (2-keto-myo-inositol, 2KMI or 2,4,6/3,5-pentahydroxycyclohexanone) to 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi-inositol). (298 aa)
iolGMyo-inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) and D-chiro- inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D- chiro-inositol (1KDCI), respectively. (344 aa)
fbaBFructose-bisphosphate aldolase, putative. (290 aa)
deoCDeoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. (222 aa)
yxiAGlycoside hydrolase family protein; Belongs to the glycosyl hydrolase 43 family. (468 aa)
pelBPectin lyase. (354 aa)
galE3UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (338 aa)
ydhTBeta-mannanase; Belongs to the glycosyl hydrolase 26 family. (360 aa)
ydhRFructokinase. (293 aa)
ydhPBeta-glucosidase; Belongs to the glycosyl hydrolase 1 family. (466 aa)
fbaAFructose-bisphosphate aldolase. (285 aa)
ywlFRibose 5-phosphate isomerase B. (149 aa)
xynAEndo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family. (213 aa)
rbsDD-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (131 aa)
rbsKRibokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (293 aa)
yvdKMaltose phosphorylase. (757 aa)
malLOligo-1,6-glucosidase. (561 aa)
gntKGluconokinase; Belongs to the FGGY kinase family. (514 aa)
gapAGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (335 aa)
pgkPhosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (394 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (253 aa)
pgm3Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the BPG-independent phosphoglycerate mutase family. (511 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (430 aa)
pgiGlucose-6-phosphate isomerase; Belongs to the GPI family. (450 aa)
yugTAlpha-glucosidase. (552 aa)
ytkLUPF0173 metal-dependent hydrolase; Belongs to the UPF0173 family. (228 aa)
pfkA6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. (319 aa)
pykAPyruvate kinase; Belongs to the pyruvate kinase family. (585 aa)
abnAArabinan endo-1,5-alpha-L-arabinosidase; Belongs to the glycosyl hydrolase 43 family. (321 aa)
araAL-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. (499 aa)
araBL-ribulokinase. (561 aa)
araDL-ribulose-5-phosphate 4-epimerase. (229 aa)
abfAalpha-N-arabinofuranosidase. (499 aa)
xsaalpha-L-arabinofuranosidase domain protein. (496 aa)
BANAU_2579UPF0173 metal-dependent hydrolase. (305 aa)
glcKGlucokinase. (320 aa)
lpdADihydrolipoamide dehydrogenase. (473 aa)
bkdBBranched-chain alpha-keto acid dehydrogenase subunit E2. (420 aa)
gnd6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. (469 aa)
bglA6-phospho-beta-glucosidase BglA; Belongs to the glycosyl hydrolase 1 family. (480 aa)
odhA2-oxoglutarate dehydrogenase E1 component; E1 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the decarboxylation of 2-oxoglutarate, the first step in the conversion of 2-oxoglutarate to succinyl-CoA and CO(2). (944 aa)
yocAMembrane-bound lytic murein transglycosylase F. (206 aa)
yoeDDNA binding domain, excisionase family. (76 aa)
yoxAPutative protein yoxA. (322 aa)
ynfFYnfF; Belongs to the glycosyl hydrolase 30 family. (423 aa)
bglCGlycoside hydrolase family 5. (501 aa)
xylBXylulokinase. (499 aa)
xynBXylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. (533 aa)
rpeRibulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (216 aa)
pdhDDihydrolipoamide dehydrogenase. (470 aa)
pdhCPyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase). (442 aa)
pdhBPyruvate dehydrogenase E1 component subunit beta. (325 aa)
pdhAPyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). (371 aa)
ydhDPutative sporulation-specific glycosylase YdhD. (420 aa)
uxaAAltronate hydrolase. (497 aa)
uxaBTagaturonate reductase. (473 aa)
lacG6-phospho-beta-galactosidase. (466 aa)
yisSDehydrogenase. (343 aa)
glpDGlycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (555 aa)
glpKGlycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. (496 aa)
acoLDihydrolipoamide dehydrogenase. (459 aa)
treATrehalose-6-phosphate hydrolase. (561 aa)
pelPectate lyase. (422 aa)
yckEAryl-phospho-beta-d-glucosidase; Belongs to the glycosyl hydrolase 1 family. (478 aa)
cahcephalosporin-C deacetylase. (318 aa)
ldhL-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. (317 aa)
ycdGPutative glycosidase. (559 aa)
Your Current Organism:
Bacillus velezensis YAUB9601Y2
NCBI taxonomy Id: 1155777
Other names: B. velezensis YAU B9601-Y2, Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2, Bacillus methylotrophicus YAU B9601-Y2, Bacillus velezensis YAU B9601-Y2
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.