STRINGSTRING
SDRG_06689 SDRG_06689 SDRG_00440 SDRG_00440 SDRG_00269 SDRG_00269 SDRG_00773 SDRG_00773 SDRG_03580 SDRG_03580 SDRG_05130 SDRG_05130 SDRG_05031 SDRG_05031 SDRG_05997 SDRG_05997 SDRG_10337 SDRG_10337 SDRG_07949 SDRG_07949 SDRG_10458 SDRG_10458 SDRG_14851 SDRG_14851 SDRG_13781 SDRG_13781 SDRG_00985 SDRG_00985 SDRG_15097 SDRG_15097 SDRG_01937 SDRG_01937 SDRG_02547 SDRG_02547 SDRG_16860 SDRG_16860 SDRG_01756 SDRG_01756 SDRG_07110 SDRG_07110 SDRG_08279 SDRG_08279 SDRG_09928 SDRG_09928 SDRG_09585 SDRG_09585 SDRG_10565 SDRG_10565 SDRG_16732 SDRG_16732 SDRG_15907 SDRG_15907
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SDRG_06689Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (961 aa)
SDRG_00440Uncharacterized protein. (352 aa)
SDRG_00269Replication protein A subunit. (649 aa)
SDRG_00773AAA domain-containing protein. (770 aa)
SDRG_03580ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (426 aa)
SDRG_05130Uncharacterized protein. (523 aa)
SDRG_05031RuvB-like helicase; Belongs to the RuvB family. (464 aa)
SDRG_05997Histone H2B; Belongs to the histone H2B family. (119 aa)
SDRG_10337Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (144 aa)
SDRG_07949CS domain-containing protein. (484 aa)
SDRG_104583'-5' exonuclease domain-containing protein. (365 aa)
SDRG_14851H/ACA ribonucleoprotein complex subunit 3. (65 aa)
SDRG_13781Uncharacterized protein. (1064 aa)
SDRG_00985H/ACA ribonucleoprotein complex subunit 4. (495 aa)
SDRG_15097Uncharacterized protein. (207 aa)
SDRG_01937Histone H2A; Belongs to the histone H2A family. (142 aa)
SDRG_02547ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (527 aa)
SDRG_16860Histone H2B; Belongs to the histone H2B family. (120 aa)
SDRG_01756TruB_N domain-containing protein. (317 aa)
SDRG_07110H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (205 aa)
SDRG_08279ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (661 aa)
SDRG_09928Mif2_N domain-containing protein. (737 aa)
SDRG_09585Uncharacterized protein. (98 aa)
SDRG_10565RuvB-like helicase; Belongs to the RuvB family. (657 aa)
SDRG_16732HD domain-containing protein. (238 aa)
SDRG_15907Uncharacterized protein. (1298 aa)
Your Current Organism:
Saprolegnia diclina
NCBI taxonomy Id: 1156394
Other names: S. diclina VS20, Saprolegnia declina VS20, Saprolegnia diclina VS20
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