STRINGSTRING
SDRG_04285 SDRG_04285 SDRG_14806 SDRG_14806 SDRG_01161 SDRG_01161 SDRG_04358 SDRG_04358
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SDRG_04285Peroxiredoxin (Alkyl hydroperoxide reductase subunit C). (267 aa)
SDRG_14806Peroxiredoxin. (204 aa)
SDRG_01161Thioredoxin domain-containing protein. (225 aa)
SDRG_04358Peroxiredoxin (Alkyl hydroperoxide reductase subunit C). (269 aa)
Your Current Organism:
Saprolegnia diclina
NCBI taxonomy Id: 1156394
Other names: S. diclina VS20, Saprolegnia declina VS20, Saprolegnia diclina VS20
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