STRINGSTRING
QWC_14542 QWC_14542 QWC_04918 QWC_04918 QWC_16174 QWC_16174 alr alr ddl ddl QWC_23895 QWC_23895 QWC_23915 QWC_23915 QWC_16169 QWC_16169 QWC_04923 QWC_04923
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
QWC_14542Aminotransferase class IV; COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. (288 aa)
QWC_04918Cyanophycin synthetase; COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes; Belongs to the MurCDEF family. (856 aa)
QWC_16174D-alanine--poly(phosphoribitol) ligase; COG1020 Non-ribosomal peptide synthetase modules and related proteins. (489 aa)
alrAlanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (375 aa)
ddlD-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. (316 aa)
QWC_23895COG0236 Acyl carrier protein. (79 aa)
QWC_23915COG1020 Non-ribosomal peptide synthetase modules and related proteins. (481 aa)
QWC_16169Phosphopantetheine-binding protein. (79 aa)
QWC_04923Cyanophycin synthetase; COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes. (871 aa)
Your Current Organism:
Achromobacter piechaudii
NCBI taxonomy Id: 1156919
Other names: A. piechaudii HLE, Achromobacter piechaudii HLE, Achromobacter piechaudii str. HLE, Achromobacter piechaudii strain HLE
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