9 items (Aspergillus glaucus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (298 aa)
	A0A1L9VBG0	Uncharacterized protein. (139 aa)
	A0A1L9VFT6	S10_plectin domain-containing protein. (154 aa)
	A0A1L9VHJ3	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (145 aa)
	A0A1L9VMR2	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (62 aa)
	A0A1L9VR51	Uncharacterized protein. (149 aa)
	A0A1L9VRH5	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (201 aa)
	A0A1L9VV90	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (87 aa)
	A0A1L9W096	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (119 aa)

Your Current Organism:

Aspergillus glaucus

NCBI taxonomy Id: 1160497
Other names: A. glaucus CBS 516.65, Aspergillus glaucus CBS 516.65

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L9VBG0	A0A1L9VFT6	A0A1L9VBG0	A0A1L9VFT6	Uncharacterized protein.	S10_plectin domain-containing protein.	0.999
A0A1L9VBG0	A0A1L9VHJ3	A0A1L9VBG0	A0A1L9VHJ3	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.999
A0A1L9VBG0	A0A1L9VMR2	A0A1L9VBG0	A0A1L9VMR2	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
A0A1L9VBG0	A0A1L9VR51	A0A1L9VBG0	A0A1L9VR51	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1L9VBG0	A0A1L9VRH5	A0A1L9VBG0	A0A1L9VRH5	Uncharacterized protein.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.999
A0A1L9VBG0	A0A1L9VV90	A0A1L9VBG0	A0A1L9VV90	Uncharacterized protein.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.999
A0A1L9VBG0	A0A1L9W096	A0A1L9VBG0	A0A1L9W096	Uncharacterized protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999
A0A1L9VBG0	RPS0	A0A1L9VBG0	A0A1L9V3M2	Uncharacterized protein.	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	0.999
A0A1L9VFT6	A0A1L9VBG0	A0A1L9VFT6	A0A1L9VBG0	S10_plectin domain-containing protein.	Uncharacterized protein.	0.999
A0A1L9VFT6	A0A1L9VHJ3	A0A1L9VFT6	A0A1L9VHJ3	S10_plectin domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.999
A0A1L9VFT6	A0A1L9VMR2	A0A1L9VFT6	A0A1L9VMR2	S10_plectin domain-containing protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
A0A1L9VFT6	A0A1L9VR51	A0A1L9VFT6	A0A1L9VR51	S10_plectin domain-containing protein.	Uncharacterized protein.	0.999
A0A1L9VFT6	A0A1L9VRH5	A0A1L9VFT6	A0A1L9VRH5	S10_plectin domain-containing protein.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.999
A0A1L9VFT6	A0A1L9VV90	A0A1L9VFT6	A0A1L9VV90	S10_plectin domain-containing protein.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.999
A0A1L9VFT6	A0A1L9W096	A0A1L9VFT6	A0A1L9W096	S10_plectin domain-containing protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999
A0A1L9VFT6	RPS0	A0A1L9VFT6	A0A1L9V3M2	S10_plectin domain-containing protein.	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	0.999
A0A1L9VHJ3	A0A1L9VBG0	A0A1L9VHJ3	A0A1L9VBG0	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.999
A0A1L9VHJ3	A0A1L9VFT6	A0A1L9VHJ3	A0A1L9VFT6	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	S10_plectin domain-containing protein.	0.999
A0A1L9VHJ3	A0A1L9VMR2	A0A1L9VHJ3	A0A1L9VMR2	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
A0A1L9VHJ3	A0A1L9VR51	A0A1L9VHJ3	A0A1L9VR51	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.999