4 items (Aspergillus glaucus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9VB43	Uncharacterized protein. (698 aa)
	A0A1L9VT22	Uncharacterized protein. (1083 aa)
	A0A1L9VUZ3	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (605 aa)
	A0A1L9VG80	Uncharacterized protein. (608 aa)

Your Current Organism:

Aspergillus glaucus

NCBI taxonomy Id: 1160497
Other names: A. glaucus CBS 516.65, Aspergillus glaucus CBS 516.65

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9VB43	A0A1L9VG80	Uncharacterized protein.	Uncharacterized protein.	0.935
A0A1L9VB43	A0A1L9VT22	Uncharacterized protein.	Uncharacterized protein.	0.881
A0A1L9VB43	A0A1L9VUZ3	Uncharacterized protein.	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.624
A0A1L9VG80	A0A1L9VB43	Uncharacterized protein.	Uncharacterized protein.	0.935
A0A1L9VG80	A0A1L9VT22	Uncharacterized protein.	Uncharacterized protein.	0.946
A0A1L9VG80	A0A1L9VUZ3	Uncharacterized protein.	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.487
A0A1L9VT22	A0A1L9VB43	Uncharacterized protein.	Uncharacterized protein.	0.881
A0A1L9VT22	A0A1L9VG80	Uncharacterized protein.	Uncharacterized protein.	0.946
A0A1L9VT22	A0A1L9VUZ3	Uncharacterized protein.	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.673
A0A1L9VUZ3	A0A1L9VB43	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Uncharacterized protein.	0.624
A0A1L9VUZ3	A0A1L9VG80	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Uncharacterized protein.	0.487
A0A1L9VUZ3	A0A1L9VT22	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Uncharacterized protein.	0.673