20 items (Aspergillus glaucus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9V838	Cytochrome c oxidase subunit 7A; This small integral protein plays a role in holoenzyme assembly or stability. (61 aa)
	A0A1L9VXJ7	4Fe-4S Mo/W bis-MGD-type domain-containing protein. (994 aa)
	A0A1L9W014	Uncharacterized protein. (51 aa)
	A0A1L9VJW1	Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family. (135 aa)
	A0A1L9VJI4	Uncharacterized protein. (155 aa)
	A0A1L9VJ63	Uncharacterized protein. (499 aa)
	A0A1L9VIU2	HIG1 domain-containing protein. (183 aa)
	A0A1L9VH68	Uncharacterized protein. (160 aa)
	A0A1L9VEW7	Uncharacterized protein. (74 aa)
	A0A1L9VCV3	Uncharacterized protein. (197 aa)
	A0A1L9VQD6	Uncharacterized protein. (69 aa)
	A0A1L9VSB5	Cytochrome c domain-containing protein. (745 aa)
	A0A1L9VT34	Uncharacterized protein. (78 aa)
	A0A1L9VV52	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit. (173 aa)
	A0A1L9VAM5	Uncharacterized protein. (85 aa)
	A0A1L9VAB7	Uncharacterized protein. (79 aa)
	A0A1L9VKE2	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). (648 aa)
	A0A1L9V9M9	Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport. (92 aa)
	A0A1L9V724	Uncharacterized protein. (119 aa)
	A0A1L9V5S6	zf-CHCC domain-containing protein. (213 aa)

Your Current Organism:

Aspergillus glaucus

NCBI taxonomy Id: 1160497
Other names: A. glaucus CBS 516.65, Aspergillus glaucus CBS 516.65

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9V5S6	A0A1L9V724	zf-CHCC domain-containing protein.	Uncharacterized protein.	0.999
A0A1L9V5S6	A0A1L9V9M9	zf-CHCC domain-containing protein.	Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.	0.932
A0A1L9V5S6	A0A1L9VAB7	zf-CHCC domain-containing protein.	Uncharacterized protein.	0.991
A0A1L9V5S6	A0A1L9VAM5	zf-CHCC domain-containing protein.	Uncharacterized protein.	0.960
A0A1L9V5S6	A0A1L9VCV3	zf-CHCC domain-containing protein.	Uncharacterized protein.	0.973
A0A1L9V5S6	A0A1L9VH68	zf-CHCC domain-containing protein.	Uncharacterized protein.	0.988
A0A1L9V5S6	A0A1L9VJ63	zf-CHCC domain-containing protein.	Uncharacterized protein.	0.995
A0A1L9V5S6	A0A1L9VJI4	zf-CHCC domain-containing protein.	Uncharacterized protein.	0.995
A0A1L9V5S6	A0A1L9VJW1	zf-CHCC domain-containing protein.	Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family.	0.982
A0A1L9V5S6	A0A1L9VKE2	zf-CHCC domain-containing protein.	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	0.743
A0A1L9V5S6	A0A1L9VQD6	zf-CHCC domain-containing protein.	Uncharacterized protein.	0.992
A0A1L9V5S6	A0A1L9VSB5	zf-CHCC domain-containing protein.	Cytochrome c domain-containing protein.	0.992
A0A1L9V5S6	A0A1L9VT34	zf-CHCC domain-containing protein.	Uncharacterized protein.	0.984
A0A1L9V5S6	A0A1L9VV52	zf-CHCC domain-containing protein.	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.	0.904
A0A1L9V5S6	A0A1L9VXJ7	zf-CHCC domain-containing protein.	4Fe-4S Mo/W bis-MGD-type domain-containing protein.	0.991
A0A1L9V5S6	A0A1L9W014	zf-CHCC domain-containing protein.	Uncharacterized protein.	0.976
A0A1L9V724	A0A1L9V5S6	Uncharacterized protein.	zf-CHCC domain-containing protein.	0.999
A0A1L9V724	A0A1L9V9M9	Uncharacterized protein.	Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.	0.958
A0A1L9V724	A0A1L9VAB7	Uncharacterized protein.	Uncharacterized protein.	0.989
A0A1L9V724	A0A1L9VAM5	Uncharacterized protein.	Uncharacterized protein.	0.903