7 items (Aspergillus glaucus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9VP58	Uncharacterized protein. (199 aa)
	A0A1L9VJZ5	Uncharacterized protein. (197 aa)
	A0A1L9VJU5	Uncharacterized protein. (198 aa)
	A0A1L9V915	Uncharacterized protein. (295 aa)
	A0A1L9V3K1	Uncharacterized protein. (205 aa)
	A0A1L9VW39	Uncharacterized protein. (192 aa)
	A0A1L9W076	Uncharacterized protein. (193 aa)

Your Current Organism:

Aspergillus glaucus

NCBI taxonomy Id: 1160497
Other names: A. glaucus CBS 516.65, Aspergillus glaucus CBS 516.65

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9V3K1	A0A1L9V915	Uncharacterized protein.	Uncharacterized protein.	0.828
A0A1L9V3K1	A0A1L9VJU5	Uncharacterized protein.	Uncharacterized protein.	0.800
A0A1L9V3K1	A0A1L9VW39	Uncharacterized protein.	Uncharacterized protein.	0.800
A0A1L9V3K1	A0A1L9W076	Uncharacterized protein.	Uncharacterized protein.	0.805
A0A1L9V915	A0A1L9V3K1	Uncharacterized protein.	Uncharacterized protein.	0.828
A0A1L9V915	A0A1L9VJU5	Uncharacterized protein.	Uncharacterized protein.	0.808
A0A1L9V915	A0A1L9VJZ5	Uncharacterized protein.	Uncharacterized protein.	0.860
A0A1L9V915	A0A1L9VP58	Uncharacterized protein.	Uncharacterized protein.	0.797
A0A1L9V915	A0A1L9VW39	Uncharacterized protein.	Uncharacterized protein.	0.807
A0A1L9V915	A0A1L9W076	Uncharacterized protein.	Uncharacterized protein.	0.875
A0A1L9VJU5	A0A1L9V3K1	Uncharacterized protein.	Uncharacterized protein.	0.800
A0A1L9VJU5	A0A1L9V915	Uncharacterized protein.	Uncharacterized protein.	0.808
A0A1L9VJU5	A0A1L9VJZ5	Uncharacterized protein.	Uncharacterized protein.	0.808
A0A1L9VJU5	A0A1L9VP58	Uncharacterized protein.	Uncharacterized protein.	0.808
A0A1L9VJU5	A0A1L9VW39	Uncharacterized protein.	Uncharacterized protein.	0.452
A0A1L9VJU5	A0A1L9W076	Uncharacterized protein.	Uncharacterized protein.	0.805
A0A1L9VJZ5	A0A1L9V915	Uncharacterized protein.	Uncharacterized protein.	0.860
A0A1L9VJZ5	A0A1L9VJU5	Uncharacterized protein.	Uncharacterized protein.	0.808
A0A1L9VJZ5	A0A1L9VP58	Uncharacterized protein.	Uncharacterized protein.	0.442
A0A1L9VJZ5	A0A1L9VW39	Uncharacterized protein.	Uncharacterized protein.	0.807