STRINGSTRING
SU9_29301 SU9_29301 SU9_03281 SU9_03281 SU9_04446 SU9_04446 SU9_05371 SU9_05371 SU9_05376 SU9_05376 kgd kgd SU9_08809 SU9_08809 fumC fumC SU9_10249 SU9_10249 SU9_10254 SU9_10254 sdhB sdhB mdh mdh sucD sucD sucC sucC SU9_11103 SU9_11103 SU9_15684 SU9_15684 SU9_15894 SU9_15894 SU9_16457 SU9_16457 SU9_16462 SU9_16462 ppc ppc gltA gltA SU9_22955 SU9_22955 aspA aspA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SU9_29301COG2838 Monomeric isocitrate dehydrogenase; Belongs to the monomeric-type IDH family. (739 aa)
SU9_03281COG2225 Malate synthase; Belongs to the malate synthase family. (542 aa)
SU9_04446Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (904 aa)
SU9_05371COG0372 Citrate synthase; Belongs to the citrate synthase family. (389 aa)
SU9_05376Citrate synthase-like protein; COG0372 Citrate synthase. (415 aa)
kgdAlpha-ketoglutarate decarboxylase; COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes. (1270 aa)
SU9_08809COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit. (265 aa)
fumCFumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (473 aa)
SU9_10249COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit. (126 aa)
SU9_10254COG2142 Succinate dehydrogenase, hydrophobic anchor subunit. (162 aa)
sdhBCOG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (257 aa)
mdhMalate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. (330 aa)
sucDsuccinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (294 aa)
sucCsuccinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (391 aa)
SU9_11103COG0372 Citrate synthase; Belongs to the citrate synthase family. (367 aa)
SU9_15684Hypothetical protein; COG1408 Predicted phosphohydrolases. (559 aa)
SU9_15894Hydroxyglutarate oxidase; COG0579 Predicted dehydrogenase. (403 aa)
SU9_16457COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit. (364 aa)
SU9_16462Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit. (650 aa)
ppcPhosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. (921 aa)
gltACOG0372 Citrate synthase; Belongs to the citrate synthase family. (429 aa)
SU9_22955Hypothetical protein; COG2129 Predicted phosphoesterases, related to the Icc protein. (258 aa)
aspACOG1027 Aspartate ammonia-lyase. (470 aa)
Your Current Organism:
Streptomyces auratus
NCBI taxonomy Id: 1160718
Other names: S. auratus AGR0001, Streptomyces auratus AGR0001, Streptomyces auratus str. AGR0001, Streptomyces auratus strain AGR0001
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