STRINGSTRING
SU9_17235 SU9_17235 psd psd SU9_03316 SU9_03316 SU9_03411 SU9_03411 SU9_03501 SU9_03501 hemE hemE SU9_04601 SU9_04601 lysA lysA kgd kgd SU9_07960 SU9_07960 pckG pckG SU9_10244 SU9_10244 SU9_12502 SU9_12502 SU9_13129 SU9_13129 SU9_13623 SU9_13623 lysA-2 lysA-2 SU9_14606 SU9_14606 SU9_16212 SU9_16212 ubiX ubiX SU9_22215 SU9_22215 trpC trpC SU9_23615 SU9_23615 SU9_23982 SU9_23982 SU9_24252 SU9_24252 SU9_24372 SU9_24372 SU9_24382 SU9_24382 SU9_24387 SU9_24387 SU9_26394 SU9_26394 SU9_27974 SU9_27974 SU9_28591 SU9_28591 SU9_29711 SU9_29711 pyrF pyrF SU9_31501 SU9_31501 SU9_32563 SU9_32563 ppc ppc SU9_18261 SU9_18261 SU9_18311 SU9_18311 purK purK SU9_18920 SU9_18920 SU9_20002 SU9_20002 SU9_21367 SU9_21367
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SU9_17235Putative amidohydrolase; COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold. (399 aa)
psdPhosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). (215 aa)
SU9_03316OHCU decarboxylase; COG3195 Uncharacterized protein conserved in bacteria. (170 aa)
SU9_03411Putative amidohydrolase/decarboxylase; COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold. (324 aa)
SU9_03501COG0019 Diaminopimelate decarboxylase. (398 aa)
hemEUroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. (355 aa)
SU9_04601Orn/DAP/Arg decarboxylase 2; COG0019 Diaminopimelate decarboxylase. (417 aa)
lysADiaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (463 aa)
kgdAlpha-ketoglutarate decarboxylase; COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes. (1270 aa)
SU9_07960Malate oxidoreductase; COG0281 Malic enzyme. (407 aa)
pckGPhosphoenolpyruvate carboxykinase; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family. (610 aa)
SU9_10244OHCU decarboxylase. (161 aa)
SU9_12502COG0076 Glutamate decarboxylase and related PLP-dependent proteins; Belongs to the group II decarboxylase family. (471 aa)
SU9_13129Amidohydrolase; COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold. (405 aa)
SU9_13623Amidohydrolase; COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold. (291 aa)
lysA-2Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (487 aa)
SU9_14606Hypothetical protein. (470 aa)
SU9_16212Decarboxylase; COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases; Belongs to the UbiD family. (484 aa)
ubiX3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (240 aa)
SU9_22215Amino acid decarboxylase; COG1982 Arginine/lysine/ornithine decarboxylases. (492 aa)
trpCCOG0134 Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. (269 aa)
SU9_23615COG0076 Glutamate decarboxylase and related PLP-dependent proteins. (471 aa)
SU9_23982Hypothetical protein. (242 aa)
SU9_24252COG1270 Cobalamin biosynthesis protein CobD/CbiB. (261 aa)
SU9_24372Hypothetical protein; COG4689 Acetoacetate decarboxylase. (265 aa)
SU9_24382Amidohydrolase; COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold; overlaps another CDS with the same product name. (467 aa)
SU9_24387Amidohydrolase; COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold; overlaps another CDS with the same product name. (408 aa)
SU9_26394COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold. (312 aa)
SU9_27974COG0019 Diaminopimelate decarboxylase. (82 aa)
SU9_28591COG0019 Diaminopimelate decarboxylase. (415 aa)
SU9_29711Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (411 aa)
pyrFCOG0284 Orotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. (287 aa)
SU9_31501COG0076 Glutamate decarboxylase and related PLP-dependent proteins. (510 aa)
SU9_32563COG3960 Glyoxylate carboligase; Belongs to the TPP enzyme family. (593 aa)
ppcPhosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. (921 aa)
SU9_18261Hypothetical protein. (304 aa)
SU9_18311Orn/DAP/Arg decarboxylase 2; COG0019 Diaminopimelate decarboxylase. (444 aa)
purKPhosphoribosylaminoimidazole carboxylase ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR). (378 aa)
SU9_18920NAD-binding malic protein; COG0281 Malic enzyme. (477 aa)
SU9_20002COG1982 Arginine/lysine/ornithine decarboxylases. (795 aa)
SU9_21367Orn/Lys/Arg decarboxylase major region; COG1982 Arginine/lysine/ornithine decarboxylases. (510 aa)
Your Current Organism:
Streptomyces auratus
NCBI taxonomy Id: 1160718
Other names: S. auratus AGR0001, Streptomyces auratus AGR0001, Streptomyces auratus str. AGR0001, Streptomyces auratus strain AGR0001
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