STRINGSTRING
SU9_23877 SU9_23877 SU9_16187 SU9_16187 SU9_16532 SU9_16532 SU9_19374 SU9_19374 SU9_24882 SU9_24882
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SU9_23877Rieske (2Fe-2S) iron-sulfur domain protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. (137 aa)
SU9_16187COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component. (362 aa)
SU9_16532NADH dehydrogenase chain M; COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M). (565 aa)
SU9_193742-aminoethylphosphonate ABC transporter substrate-binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component. (359 aa)
SU9_24882Rieske (2Fe-2S) domain-containing protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. (106 aa)
Your Current Organism:
Streptomyces auratus
NCBI taxonomy Id: 1160718
Other names: S. auratus AGR0001, Streptomyces auratus AGR0001, Streptomyces auratus str. AGR0001, Streptomyces auratus strain AGR0001
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