STRINGSTRING
SU9_04601 SU9_04601 SU9_03501 SU9_03501 SU9_28591 SU9_28591 lysA-2 lysA-2 SU9_18311 SU9_18311 lysA lysA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SU9_04601Orn/DAP/Arg decarboxylase 2; COG0019 Diaminopimelate decarboxylase. (417 aa)
SU9_03501COG0019 Diaminopimelate decarboxylase. (398 aa)
SU9_28591COG0019 Diaminopimelate decarboxylase. (415 aa)
lysA-2Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (487 aa)
SU9_18311Orn/DAP/Arg decarboxylase 2; COG0019 Diaminopimelate decarboxylase. (444 aa)
lysADiaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (463 aa)
Your Current Organism:
Streptomyces auratus
NCBI taxonomy Id: 1160718
Other names: S. auratus AGR0001, Streptomyces auratus AGR0001, Streptomyces auratus str. AGR0001, Streptomyces auratus strain AGR0001
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