STRINGSTRING
SU9_18573 SU9_18573 SU9_11438 SU9_11438 SU9_17580 SU9_17580 SU9_19155 SU9_19155 SU9_19160 SU9_19160
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SU9_18573PTS system mannose-specific transporter subunits IIBCA; COG1445 Phosphotransferase system fructose-specific component IIB. (722 aa)
SU9_11438COG1264 Phosphotransferase system IIB components. (580 aa)
SU9_17580PTS system fructose subfamily transporter subunit IIC; COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type). (689 aa)
SU9_19155PTS system transporter subunit IIC; COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific. (423 aa)
SU9_19160PTS transmembrane protein; COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific. (437 aa)
Your Current Organism:
Streptomyces auratus
NCBI taxonomy Id: 1160718
Other names: S. auratus AGR0001, Streptomyces auratus AGR0001, Streptomyces auratus str. AGR0001, Streptomyces auratus strain AGR0001
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