Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BAN33874.1 | BAN34072.1 | SCD_n00025 | SCD_n00223 | Aminotransferase. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.410 |
| BAN33874.1 | BAN34187.1 | SCD_n00025 | SCD_n00338 | Aminotransferase. | Class I and II aminotransferase; K14155. | 0.911 |
| BAN33874.1 | BAN34961.1 | SCD_n00025 | SCD_n01127 | Aminotransferase. | Class I and II aminotransferase; K14260. | 0.900 |
| BAN33874.1 | BAN35373.1 | SCD_n00025 | SCD_n01551 | Aminotransferase. | Class I/II aminotransferase; K00812. | 0.919 |
| BAN33874.1 | BAN35460.1 | SCD_n00025 | SCD_n01639 | Aminotransferase. | aromatic-L-amino-acid decarboxylase. | 0.910 |
| BAN33874.1 | BAN36036.1 | SCD_n00025 | SCD_n02228 | Aminotransferase. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; K03737. | 0.556 |
| BAN33874.1 | hisC | SCD_n00025 | SCD_n00587 | Aminotransferase. | Histidinol-phosphate aminotransferase; K00817; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.814 |
| BAN33874.1 | hisC-2 | SCD_n00025 | SCD_n01029 | Aminotransferase. | HisH protein; K00817; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.837 |
| BAN33874.1 | sucA | SCD_n00025 | SCD_n01500 | Aminotransferase. | 2-oxoglutarate dehydrogenase E1; K00164. | 0.827 |
| BAN33921.1 | BAN36036.1 | SCD_n00072 | SCD_n02228 | Alanine racemase domain protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; K03737. | 0.566 |
| BAN33996.1 | BAN33998.1 | SCD_n00147 | SCD_n00149 | Cystathionine gamma-synthase; K01739. | Class V aminotransferase; K04487. | 0.659 |
| BAN33996.1 | BAN34072.1 | SCD_n00147 | SCD_n00223 | Cystathionine gamma-synthase; K01739. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.982 |
| BAN33996.1 | BAN34187.1 | SCD_n00147 | SCD_n00338 | Cystathionine gamma-synthase; K01739. | Class I and II aminotransferase; K14155. | 0.941 |
| BAN33996.1 | ilvA | SCD_n00147 | SCD_n00393 | Cystathionine gamma-synthase; K01739. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.840 |
| BAN33996.1 | metZ | SCD_n00147 | SCD_n00890 | Cystathionine gamma-synthase; K01739. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.914 |
| BAN33998.1 | BAN33996.1 | SCD_n00149 | SCD_n00147 | Class V aminotransferase; K04487. | Cystathionine gamma-synthase; K01739. | 0.659 |
| BAN34072.1 | BAN33874.1 | SCD_n00223 | SCD_n00025 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Aminotransferase. | 0.410 |
| BAN34072.1 | BAN33996.1 | SCD_n00223 | SCD_n00147 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Cystathionine gamma-synthase; K01739. | 0.982 |
| BAN34072.1 | BAN34187.1 | SCD_n00223 | SCD_n00338 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Class I and II aminotransferase; K14155. | 0.936 |
| BAN34072.1 | BAN34659.1 | SCD_n00223 | SCD_n00818 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Acetolactate synthase, large subunit, biosynthetic type; K01652. | 0.424 |
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