STRINGSTRING
RBP3 RBP3 FAES_0293 FAES_0293 FAES_0860 FAES_0860 glgB glgB FAES_1990 FAES_1990 FAES_2328 FAES_2328 FAES_2329 FAES_2329 FAES_2331 FAES_2331 FAES_2332 FAES_2332 FAES_2333 FAES_2333 FAES_2340 FAES_2340 FAES_2552 FAES_2552 FAES_2630 FAES_2630 FAES_3009 FAES_3009 FAES_3356 FAES_3356 treZ treZ irk irk FAES_4336 FAES_4336 FAES_4347 FAES_4347
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RBP3Retinol-binding protein 3 Interphotoreceptor retinoid-binding protein. (438 aa)
FAES_0293Cell surface receptor IPT/TIG domain protein. (567 aa)
FAES_0860Hypothetical protein. (769 aa)
glgB1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (675 aa)
FAES_1990Oxidoreductase molybdopterin binding protein. (412 aa)
FAES_2328Putative esterase. (643 aa)
FAES_2329Putative esterase. (398 aa)
FAES_2331Putative esterase. (372 aa)
FAES_2332Putative esterase. (357 aa)
FAES_2333Putative esterase. (387 aa)
FAES_2340Glycoside hydrolase family 9 domain protein. (845 aa)
FAES_2552Isoamylase N-terminal domain-containing protein. (116 aa)
FAES_2630Oxidoreductase molybdopterin binding protein. (409 aa)
FAES_3009Glycogen debranching enzyme GlgX. (701 aa)
FAES_3356Alpha amylase catalytic region; Belongs to the glycosyl hydrolase 13 family. (629 aa)
treZMaltooligosyltrehalose trehalohydrolase. (748 aa)
irkInward rectifier potassium channel 2 Potassium channel, inwardly rectifying subfamily J member 2. (353 aa)
FAES_4336Cell surface receptor IPT/TIG domain protein. (358 aa)
FAES_4347Glycoside hydrolase family 9. (613 aa)
Your Current Organism:
Fibrella aestuarina
NCBI taxonomy Id: 1166018
Other names: F. aestuarina BUZ 2, Fibrella aestuarina BUZ 2, Fibrella aestuarina str. BUZ 2, Fibrella aestuarina strain BUZ 2, Flexibacteraceae bacterium BUZ 2
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