(33 nodes) Mixed, incl. Protein tyrosine/serine/threonine phosphatase activity, and Regulation of cell septum assembly network (Coniosporium apollinis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W97_00128	Uncharacterized protein. (214 aa)
	W97_00545	Uncharacterized protein. (1905 aa)
	W97_00625	Uncharacterized protein. (317 aa)
	W97_00699	Rab-GAP TBC domain-containing protein. (1151 aa)
	W97_00894	Uncharacterized protein. (837 aa)
	W97_01077	BZIP domain-containing protein. (664 aa)
	W97_01488	Uncharacterized protein. (656 aa)
	W97_01596	Uncharacterized protein. (1095 aa)
	W97_01776	Uncharacterized protein. (310 aa)
	W97_01889	STE/STE11/CDC15 protein kinase. (1418 aa)
	W97_01995	DSPc domain-containing protein. (91 aa)
	W97_02900	Uncharacterized protein. (302 aa)
	W97_03070	Uncharacterized protein. (1728 aa)
	W97_03168	WW domain-containing protein. (283 aa)
	W97_03227	TYR_PHOSPHATASE_2 domain-containing protein. (644 aa)
	W97_03509	Rab-GAP TBC domain-containing protein. (339 aa)
	W97_03816	Uncharacterized protein. (617 aa)
	W97_04025	Uncharacterized protein. (353 aa)
	W97_04062	BZIP domain-containing protein. (323 aa)
	W97_03999	Uncharacterized protein. (378 aa)
	W97_04809	Uncharacterized protein. (371 aa)
	W97_05294	Uncharacterized protein. (241 aa)
	W97_05768	Uncharacterized protein. (346 aa)
	W97_05938	IRE protein kinase. (1153 aa)
	W97_06226	Uncharacterized protein. (231 aa)
	W97_06641	AGC/NDR/NDR protein kinase. (630 aa)
	W97_06469	Bul1_C domain-containing protein. (511 aa)
	W97_06865	CENP-T_C domain-containing protein. (529 aa)
	W97_07390	AGC/NDR protein kinase. (737 aa)
	W97_08013	AGC/NDR/NDRprotein kinase. (669 aa)
	W97_08066	Alkaline phosphatase. (614 aa)
	W97_08698	CAMK/CAMKL/KIN4 protein kinase. (1220 aa)
	W97_08837	Uncharacterized protein. (377 aa)

Your Current Organism:

Coniosporium apollinis

NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W97_00128	W97_00625	R7YGA5	R7YHM6	Uncharacterized protein.	Uncharacterized protein.	0.579
W97_00128	W97_01488	R7YGA5	R7YK14	Uncharacterized protein.	Uncharacterized protein.	0.402
W97_00128	W97_03168	R7YGA5	R7YPU0	Uncharacterized protein.	WW domain-containing protein.	0.480
W97_00128	W97_03227	R7YGA5	R7YQ26	Uncharacterized protein.	TYR_PHOSPHATASE_2 domain-containing protein.	0.448
W97_00128	W97_03816	R7YGA5	R7YRX2	Uncharacterized protein.	Uncharacterized protein.	0.424
W97_00128	W97_03999	R7YGA5	R7YSY4	Uncharacterized protein.	Uncharacterized protein.	0.579
W97_00128	W97_04025	R7YGA5	R7YS85	Uncharacterized protein.	Uncharacterized protein.	0.424
W97_00128	W97_04809	R7YGA5	R7YV89	Uncharacterized protein.	Uncharacterized protein.	0.424
W97_00128	W97_05938	R7YGA5	R7YXR7	Uncharacterized protein.	IRE protein kinase.	0.462
W97_00128	W97_06641	R7YGA5	R7YZX4	Uncharacterized protein.	AGC/NDR/NDR protein kinase.	0.453
W97_00128	W97_07390	R7YGA5	R7Z1C5	Uncharacterized protein.	AGC/NDR protein kinase.	0.665
W97_00128	W97_08013	R7YGA5	R7Z3I3	Uncharacterized protein.	AGC/NDR/NDRprotein kinase.	0.453
W97_00128	W97_08066	R7YGA5	R7Z3X6	Uncharacterized protein.	Alkaline phosphatase.	0.480
W97_00545	W97_00625	R7YHE7	R7YHM6	Uncharacterized protein.	Uncharacterized protein.	0.457
W97_00545	W97_00699	R7YHE7	R7YI48	Uncharacterized protein.	Rab-GAP TBC domain-containing protein.	0.406
W97_00545	W97_00894	R7YHE7	R7YIH2	Uncharacterized protein.	Uncharacterized protein.	0.616
W97_00545	W97_01596	R7YHE7	R7YKN4	Uncharacterized protein.	Uncharacterized protein.	0.474
W97_00545	W97_01889	R7YHE7	R7YL92	Uncharacterized protein.	STE/STE11/CDC15 protein kinase.	0.990
W97_00545	W97_03070	R7YHE7	R7YPL5	Uncharacterized protein.	Uncharacterized protein.	0.661
W97_00545	W97_03227	R7YHE7	R7YQ26	Uncharacterized protein.	TYR_PHOSPHATASE_2 domain-containing protein.	0.771