12 items (Coniosporium apollinis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W97_00486	Uncharacterized protein. (310 aa)
	W97_00512	Uncharacterized protein. (341 aa)
	W97_01244	Thioredoxin-like_fold domain-containing protein. (208 aa)
	W97_02275	Uncharacterized protein. (384 aa)
	W97_03086	Uncharacterized protein. (404 aa)
	W97_03398	Uncharacterized protein. (1107 aa)
	W97_03484	Uncharacterized protein. (415 aa)
	W97_04202	HMG box domain-containing protein. (217 aa)
	W97_06881	Uncharacterized protein. (547 aa)
	W97_07510	Hist_deacetyl domain-containing protein. (1148 aa)
	W97_07664	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (500 aa)
	W97_07679	Hist_deacetyl domain-containing protein. (671 aa)

Your Current Organism:

Coniosporium apollinis

NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W97_00486	W97_00512	R7YHA4	R7YHL4	Uncharacterized protein.	Uncharacterized protein.	0.572
W97_00486	W97_01244	R7YHA4	R7YJF1	Uncharacterized protein.	Thioredoxin-like_fold domain-containing protein.	0.625
W97_00486	W97_02275	R7YHA4	R7YMF3	Uncharacterized protein.	Uncharacterized protein.	0.572
W97_00486	W97_03086	R7YHA4	R7YPT3	Uncharacterized protein.	Uncharacterized protein.	0.536
W97_00486	W97_03398	R7YHA4	R7YQP7	Uncharacterized protein.	Uncharacterized protein.	0.547
W97_00486	W97_03484	R7YHA4	R7YQX3	Uncharacterized protein.	Uncharacterized protein.	0.625
W97_00486	W97_04202	R7YHA4	R7YSR2	Uncharacterized protein.	HMG box domain-containing protein.	0.465
W97_00486	W97_06881	R7YHA4	R7Z0A2	Uncharacterized protein.	Uncharacterized protein.	0.656
W97_00486	W97_07510	R7YHA4	R7Z257	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.687
W97_00486	W97_07664	R7YHA4	R7Z342	Uncharacterized protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.828
W97_00486	W97_07679	R7YHA4	R7Z356	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.828
W97_00512	W97_00486	R7YHL4	R7YHA4	Uncharacterized protein.	Uncharacterized protein.	0.572
W97_00512	W97_01244	R7YHL4	R7YJF1	Uncharacterized protein.	Thioredoxin-like_fold domain-containing protein.	0.564
W97_00512	W97_03086	R7YHL4	R7YPT3	Uncharacterized protein.	Uncharacterized protein.	0.405
W97_00512	W97_03398	R7YHL4	R7YQP7	Uncharacterized protein.	Uncharacterized protein.	0.546
W97_00512	W97_03484	R7YHL4	R7YQX3	Uncharacterized protein.	Uncharacterized protein.	0.564
W97_00512	W97_04202	R7YHL4	R7YSR2	Uncharacterized protein.	HMG box domain-containing protein.	0.522
W97_00512	W97_06881	R7YHL4	R7Z0A2	Uncharacterized protein.	Uncharacterized protein.	0.469
W97_00512	W97_07510	R7YHL4	R7Z257	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.492
W97_00512	W97_07664	R7YHL4	R7Z342	Uncharacterized protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.604