22 items (Coniosporium apollinis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W97_09352	Uncharacterized protein. (489 aa)
	W97_00983	Uncharacterized protein. (352 aa)
	W97_00552	Uncharacterized protein. (852 aa)
	W97_01575	Uncharacterized protein. (592 aa)
	W97_02455	FHA domain-containing protein. (696 aa)
	W97_03242	Uncharacterized protein. (482 aa)
	W97_03197	BRCT domain-containing protein. (674 aa)
	W97_03223	Uncharacterized protein. (567 aa)
	W97_03375	DNA ligase. (1006 aa)
	W97_03324	BRCT domain-containing protein. (370 aa)
	W97_03739	BRCT domain-containing protein. (714 aa)
	W97_04390	Histone H2B; Belongs to the histone H2B family. (138 aa)
	W97_04276	Uncharacterized protein. (446 aa)
	W97_05306	Uncharacterized protein. (314 aa)
	W97_05722	FHA domain-containing protein. (701 aa)
	W97_06593	Uncharacterized protein. (561 aa)
	W97_07060	Uncharacterized protein. (486 aa)
	W97_08061	Uncharacterized protein. (541 aa)
	W97_08238	Uncharacterized protein. (657 aa)
	W97_08350	Cyclin N-terminal domain-containing protein. (382 aa)
	W97_08613	DNA_LIGASE_A3 domain-containing protein. (840 aa)
	W97_09247	Uncharacterized protein. (427 aa)

Your Current Organism:

Coniosporium apollinis

NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W97_00552	W97_02455	R7YHQ6	R7YMZ0	Uncharacterized protein.	FHA domain-containing protein.	0.691
W97_00552	W97_03375	R7YHQ6	R7YQF8	Uncharacterized protein.	DNA ligase.	0.436
W97_00552	W97_04390	R7YHQ6	R7YTJ0	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.678
W97_00552	W97_05722	R7YHQ6	R7YWZ2	Uncharacterized protein.	FHA domain-containing protein.	0.691
W97_00552	W97_08238	R7YHQ6	R7Z467	Uncharacterized protein.	Uncharacterized protein.	0.646
W97_00552	W97_09247	R7YHQ6	R7Z745	Uncharacterized protein.	Uncharacterized protein.	0.691
W97_00983	W97_03375	R7YIL8	R7YQF8	Uncharacterized protein.	DNA ligase.	0.674
W97_00983	W97_03739	R7YIL8	R7YS72	Uncharacterized protein.	BRCT domain-containing protein.	0.415
W97_00983	W97_08238	R7YIL8	R7Z467	Uncharacterized protein.	Uncharacterized protein.	0.402
W97_00983	W97_08613	R7YIL8	R7Z5G9	Uncharacterized protein.	DNA_LIGASE_A3 domain-containing protein.	0.674
W97_01575	W97_03375	R7YKL3	R7YQF8	Uncharacterized protein.	DNA ligase.	0.674
W97_01575	W97_03739	R7YKL3	R7YS72	Uncharacterized protein.	BRCT domain-containing protein.	0.415
W97_01575	W97_08238	R7YKL3	R7Z467	Uncharacterized protein.	Uncharacterized protein.	0.402
W97_01575	W97_08613	R7YKL3	R7Z5G9	Uncharacterized protein.	DNA_LIGASE_A3 domain-containing protein.	0.674
W97_02455	W97_00552	R7YMZ0	R7YHQ6	FHA domain-containing protein.	Uncharacterized protein.	0.691
W97_02455	W97_03197	R7YMZ0	R7YQ45	FHA domain-containing protein.	BRCT domain-containing protein.	0.691
W97_02455	W97_03324	R7YMZ0	R7YQM6	FHA domain-containing protein.	BRCT domain-containing protein.	0.691
W97_02455	W97_04390	R7YMZ0	R7YTJ0	FHA domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.630
W97_02455	W97_08238	R7YMZ0	R7Z467	FHA domain-containing protein.	Uncharacterized protein.	0.535
W97_03197	W97_02455	R7YQ45	R7YMZ0	BRCT domain-containing protein.	FHA domain-containing protein.	0.691