STRINGSTRING
RPS1 RPS1 PDIG_75610 PDIG_75610 PDIG_74470 PDIG_74470 PDIG_52000 PDIG_52000 PDIG_18470 PDIG_18470 PDIG_06610 PDIG_06610 PDIG_04680 PDIG_04680
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPS140S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (256 aa)
PDIG_75610Ribosomal protein S13p/S18e; Belongs to the universal ribosomal protein uS13 family. (155 aa)
PDIG_7447040S ribosomal protein S10b. (165 aa)
PDIG_52000RNA polymerase I specific transcription initiation factor Rrn7, putative. (770 aa)
PDIG_1847040S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (133 aa)
PDIG_0661040S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (96 aa)
PDIG_0468040S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (260 aa)
Your Current Organism:
Penicillium digitatum
NCBI taxonomy Id: 1170229
Other names: P. digitatum PHI26, Penicillium digitatum PHI26
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