STRINGSTRING
YTM1 YTM1 PDIG_90220 PDIG_90220 PDIG_90430 PDIG_90430 LSM4 LSM4 PDIG_89620 PDIG_89620 PDIG_89150 PDIG_89150 PDIG_86410 PDIG_86410 PDIG_86910 PDIG_86910 PDIG_87740 PDIG_87740 PDIG_84710 PDIG_84710 PDIG_84050 PDIG_84050 PDIG_85450 PDIG_85450 PDIG_84650 PDIG_84650 PDIG_90660 PDIG_90660 PDIG_82840 PDIG_82840 PDIG_82370 PDIG_82370 PDIG_82420 PDIG_82420 PDIG_89720 PDIG_89720 PDIG_82560 PDIG_82560 PDIG_86580 PDIG_86580 PDIG_78310 PDIG_78310 PDIG_79370 PDIG_79370 PDIG_77950 PDIG_77950 PDIG_84360 PDIG_84360 PDIG_76060 PDIG_76060 PDIG_78080 PDIG_78080 PDIG_77590 PDIG_77590 PDIG_71250 PDIG_71250 PDIG_71290 PDIG_71290 PDIG_70350 PDIG_70350 PDIG_66640 PDIG_66640 PDIG_66840 PDIG_66840 PDIG_64000 PDIG_64000 PDIG_64240 PDIG_64240 PDIG_70480 PDIG_70480 PDIG_63320 PDIG_63320 PDIG_61800 PDIG_61800 PDIG_59740 PDIG_59740 PDIG_61640 PDIG_61640 PDIG_66510 PDIG_66510 PDIG_66810 PDIG_66810 PDIG_58710 PDIG_58710 PDIG_59730 PDIG_59730 PDIG_58550 PDIG_58550 PDIG_55230 PDIG_55230 PDIG_57320 PDIG_57320 PDIG_53980 PDIG_53980 PDIG_59670 PDIG_59670 PDIG_50960 PDIG_50960 PDIG_53120 PDIG_53120 PDIG_51110 PDIG_51110 PDIG_51360 PDIG_51360 PDIG_89340 PDIG_89340 PDIG_89440 PDIG_89440 PDIG_58530 PDIG_58530 PDIG_49260 PDIG_49260 PDIG_52360 PDIG_52360 PDIG_50910 PDIG_50910 PDIG_50270 PDIG_50270 PDIG_84960 PDIG_84960 PDIG_84740 PDIG_84740 PDIG_45300 PDIG_45300 PDIG_46100 PDIG_46100 PDIG_52650 PDIG_52650 PDIG_83970 PDIG_83970 PDIG_52040 PDIG_52040 PDIG_43390 PDIG_43390 PDIG_90980 PDIG_90980 PDIG_46090 PDIG_46090 PDIG_46140 PDIG_46140 PDIG_81400 PDIG_81400 PDIG_81600 PDIG_81600 PDIG_48740 PDIG_48740 PDIG_48010 PDIG_48010 PDIG_43730 PDIG_43730 PDIG_44130 PDIG_44130 PDIG_43280 PDIG_43280 PDIG_43330 PDIG_43330 PDIG_78090 PDIG_78090 PDIG_42650 PDIG_42650 ERB1 ERB1 PDIG_45270 PDIG_45270 PDIG_41380 PDIG_41380 PDIG_45670 PDIG_45670 PDIG_86220 PDIG_86220 PDIG_46120 PDIG_46120 PDIG_76630 PDIG_76630 PDIG_86100 PDIG_86100 PDIG_37440 PDIG_37440 NAT10 NAT10 PDIG_43760 PDIG_43760 PDIG_40970 PDIG_40970 PDIG_41020 PDIG_41020 PDIG_38460 PDIG_38460 PDIG_73670 PDIG_73670 PDIG_83330 PDIG_83330 PDIG_34510 PDIG_34510 PDIG_37730 PDIG_37730 PDIG_82900 PDIG_82900 PDIG_40760 PDIG_40760 PDIG_34060 PDIG_34060 PDIG_36500 PDIG_36500 PDIG_80980 PDIG_80980 PDIG_34970 PDIG_34970 PDIG_71330 PDIG_71330 PDIG_38110 PDIG_38110 PDIG_36230 PDIG_36230 PDIG_34050 PDIG_34050 PDIG_70940 PDIG_70940 PDIG_69230 PDIG_69230 PDIG_69530 PDIG_69530 PDIG_27230 PDIG_27230 PDIG_25130 PDIG_25130 PDIG_24850 PDIG_24850 PDIG_24900 PDIG_24900 PDIG_75400 PDIG_75400 PDIG_65370 PDIG_65370 PDIG_66470 PDIG_66470 PDIG_30840 PDIG_30840 PDIG_26150 PDIG_26150 PDIG_73320 PDIG_73320 PDIG_28730 PDIG_28730 PDIG_27720 PDIG_27720 PDIG_27250 PDIG_27250 PDIG_26700 PDIG_26700 PDIG_22840 PDIG_22840 PDIG_26180 PDIG_26180 PDIG_19960 PDIG_19960 PDIG_62020 PDIG_62020 SPB1 SPB1 PDIG_70270 PDIG_70270 PDIG_18870 PDIG_18870 PDIG_21410 PDIG_21410 PDIG_69760 PDIG_69760 PDIG_18410 PDIG_18410 NOP7 NOP7 PDIG_58340 PDIG_58340 PDIG_19380 PDIG_19380 PDIG_14700 PDIG_14700 PDIG_18550 PDIG_18550 PDIG_66950 PDIG_66950 PDIG_56820 PDIG_56820 PDIG_67100 PDIG_67100 FEN1 FEN1 PDIG_13840 PDIG_13840 PDIG_56240 PDIG_56240 PDIG_67700 PDIG_67700 PDIG_19110 PDIG_19110 PDIG_15830 PDIG_15830 PDIG_11860 PDIG_11860 PDIG_61560 PDIG_61560 PDIG_51950 PDIG_51950 PDIG_13640 PDIG_13640 PDIG_10380 PDIG_10380 PDIG_60650 PDIG_60650 PDIG_15510 PDIG_15510 PDIG_14570 PDIG_14570 PDIG_14290 PDIG_14290 PDIG_51600 PDIG_51600 PDIG_51700 PDIG_51700 PDIG_59560 PDIG_59560 PDIG_57720 PDIG_57720 PDIG_07530 PDIG_07530 PDIG_58570 PDIG_58570 PDIG_58670 PDIG_58670 PDIG_06880 PDIG_06880 PDIG_07230 PDIG_07230 PDIG_11700 PDIG_11700 PDIG_57390 PDIG_57390 PDIG_06780 PDIG_06780 PDIG_10970 PDIG_10970 PDIG_47320 PDIG_47320 LSM3 LSM3 PDIG_05770 PDIG_05770 PDIG_05820 PDIG_05820 PDIG_07910 PDIG_07910 PDIG_02820 PDIG_02820 PDIG_07670 PDIG_07670 PDIG_43370 PDIG_43370 PDIG_43720 PDIG_43720 PDIG_44120 PDIG_44120 PDIG_54040 PDIG_54040 PDIG_07100 PDIG_07100 PDIG_01110 PDIG_01110 PDIG_42790 PDIG_42790 PDIG_05440 PDIG_05440 PDIG_52080 PDIG_52080 PDIG_06210 PDIG_06210 PDIG_06260 PDIG_06260 PDIG_03250 PDIG_03250 PDIG_50630 PDIG_50630 PDIG_48920 PDIG_48920 PDIG_01030 PDIG_01030 PDIG_47630 PDIG_47630 PDIG_46810 PDIG_46810 PDIG_46960 PDIG_46960 PDIG_00040 PDIG_00040 PDIG_34810 PDIG_34810 PDIG_35160 PDIG_35160 PDIG_34680 PDIG_34680 PDIG_41470 PDIG_41470 PDIG_41010 PDIG_41010 PDIG_41210 PDIG_41210 PDIG_30500 PDIG_30500 PDIG_29120 PDIG_29120 PDIG_28540 PDIG_28540 PDIG_28740 PDIG_28740 PDIG_27260 PDIG_27260 PDIG_26560 PDIG_26560 PDIG_21300 PDIG_21300 PDIG_20940 PDIG_20940 PDIG_29350 PDIG_29350 PDIG_28570 PDIG_28570 PDIG_19470 PDIG_19470 PDIG_27610 PDIG_27610 PDIG_18390 PDIG_18390 PDIG_15920 PDIG_15920 PDIG_14920 PDIG_14920 PDIG_15520 PDIG_15520 PDIG_13760 PDIG_13760 PDIG_19620 PDIG_19620 PDIG_01070 PDIG_01070 PDIG_20020 PDIG_20020 PDIG_11060 PDIG_11060 PDIG_19250 PDIG_19250 PDIG_19450 PDIG_19450 PDIG_18880 PDIG_18880 PDIG_07710 PDIG_07710 PDIG_15600 PDIG_15600 PDIG_12690 PDIG_12690 PDIG_11870 PDIG_11870 PDIG_12270 PDIG_12270 PDIG_06740 PDIG_06740 PDIG_01530 PDIG_01530
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (1329 aa)
PDIG_90220Exosome complex subunit Rrp46, putative. (249 aa)
PDIG_90430Nucleolar protein 16. (234 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (121 aa)
PDIG_89620Actin cortical patch component, putative. (234 aa)
PDIG_89150Poly [ADP-ribose] polymerase. (707 aa)
PDIG_86410rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (404 aa)
PDIG_86910Utp12 domain-containing protein. (833 aa)
PDIG_87740Uncharacterized protein. (109 aa)
PDIG_84710Centromere/microtubule-binding protein CBF5. (762 aa)
PDIG_84050Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (369 aa)
PDIG_85450Uncharacterized protein. (89 aa)
PDIG_8465025S rRNA adenine-N(1) methyltransferase; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of an adenine present in helix 65 in 25S rRNA; Belongs to the BMT2 family. (283 aa)
PDIG_90660Small nucleolar ribonucleoprotein complex subunit Utp15, putative. (542 aa)
PDIG_82840Pre-rRNA processing protein Esf1, putative. (711 aa)
PDIG_82370HEAT repeat protein (DRIM), putative. (2618 aa)
PDIG_82420DNA polymerase V, putative. (983 aa)
PDIG_89720Ribosome biogenesis protein nsa2. (261 aa)
PDIG_82560BED-type domain-containing protein. (119 aa)
PDIG_86580DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1268 aa)
PDIG_78310HMG-like protein, putative. (225 aa)
PDIG_79370Uncharacterized protein. (130 aa)
PDIG_77950Urb2 domain-containing protein. (1483 aa)
PDIG_84360U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (714 aa)
PDIG_76060U3 small nucleolar ribonucleoprotein Lcp5, putative. (379 aa)
PDIG_78080BRCT domain-containing protein. (348 aa)
PDIG_77590Sm domain-containing protein. (121 aa)
PDIG_71250rRNA biogenesis protein RRP5, putative. (2158 aa)
PDIG_71290Uncharacterized protein. (328 aa)
PDIG_70350DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1165 aa)
PDIG_66640RNA processing protein Grc3, putative. (820 aa)
PDIG_66840RNA binding protein, putative. (974 aa)
PDIG_64000Ribosome biogenesis protein Kri1. (609 aa)
PDIG_64240Protein-tyrosine phosphatase, putative. (606 aa)
PDIG_704803-methyl-2-oxobutanoate dehydrogenase, putative. (386 aa)
PDIG_6332060S ribosome biogenesis protein Rrp14, putative. (689 aa)
PDIG_61800Exosome complex component ski6. (508 aa)
PDIG_59740ATP-dependent RNA helicase, putative; Belongs to the DEAD box helicase family. (494 aa)
PDIG_61640TRASH domain-containing protein. (190 aa)
PDIG_66510Exosome complex exonuclease Rrp40, putative. (272 aa)
PDIG_66810Pre-rRNA processing nucleolar protein Sik1, putative. (514 aa)
PDIG_58710Pre-rRNA-processing protein pno1. (255 aa)
PDIG_59730Brix domain-containing protein. (448 aa)
PDIG_58550PINc domain-containing protein. (193 aa)
PDIG_55230Uncharacterized protein. (532 aa)
PDIG_57320Fibrillarin, putative. (357 aa)
PDIG_53980Protein kinase, putative. (645 aa)
PDIG_59670Small nucleolar ribonucleoprotein complex subunit (SOF1), putative. (447 aa)
PDIG_50960Uncharacterized protein. (372 aa)
PDIG_53120Eukaryotic translation initiation factor eIF-4A subunit, putative; Belongs to the DEAD box helicase family. (399 aa)
PDIG_51110Uncharacterized protein. (835 aa)
PDIG_51360HMG box protein, putative. (299 aa)
PDIG_89340Uncharacterized protein. (459 aa)
PDIG_89440Ribosome biogenesis protein Noc4, putative. (549 aa)
PDIG_58530SnoRNA binding protein, putative. (1031 aa)
PDIG_49260rRNA-processing protein; Involved in nucleolar integrity and required for processing of the pre-rRNA for the 60S ribosome subunit. Belongs to the CGR1 family. (115 aa)
PDIG_52360Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (560 aa)
PDIG_50910Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (307 aa)
PDIG_50270ATP-dependent RNA helicase (Hrh1), putative. (809 aa)
PDIG_84960RNA processing factor 1. (431 aa)
PDIG_84740DUF2431 domain-containing protein. (399 aa)
PDIG_45300Protein MAK16; Belongs to the MAK16 family. (317 aa)
PDIG_46100rRNA biogenesis protein rrp36. (345 aa)
PDIG_52650Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (764 aa)
PDIG_83970Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4919 aa)
PDIG_52040Uncharacterized protein. (1164 aa)
PDIG_43390SWIM-type domain-containing protein. (196 aa)
PDIG_90980Nuclear protein (Sgd1), putative. (884 aa)
PDIG_46090FCP1 homology domain-containing protein. (664 aa)
PDIG_46140Uncharacterized protein. (193 aa)
PDIG_81400Uncharacterized protein. (470 aa)
PDIG_81600Nucleolar protein 9. (723 aa)
PDIG_48740zf-LYAR domain-containing protein. (523 aa)
PDIG_48010Ribosome biogenesis protein Urb1, putative. (1128 aa)
PDIG_43730Uncharacterized protein. (142 aa)
PDIG_44130Pre-rRNA processing protein Tsr1, putative. (803 aa)
PDIG_43280Uncharacterized protein. (185 aa)
PDIG_43330Uncharacterized protein. (618 aa)
PDIG_78090Imp4 protein, putative. (293 aa)
PDIG_42650U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (716 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (768 aa)
PDIG_45270Checkpoint protein; Belongs to the HUS1 family. (336 aa)
PDIG_41380Dimer_Tnp_hAT domain-containing protein. (317 aa)
PDIG_45670DEAH-box RNA helicase (Dhr1), putative. (1211 aa)
PDIG_86220Small nucleolar ribonucleoprotein complex subunit, putative. (616 aa)
PDIG_46120RNA_pol_L_2 domain-containing protein. (138 aa)
PDIG_76630Uncharacterized protein. (364 aa)
PDIG_86100Protein bfr2. (525 aa)
PDIG_37440DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (876 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1035 aa)
PDIG_437603' exoribonuclease family protein (Rrp42), putative. (384 aa)
PDIG_40970Exosome complex exonuclease exoribonuclease (Rrp44), putative; Belongs to the RNR ribonuclease family. (1071 aa)
PDIG_41020Uncharacterized protein. (63 aa)
PDIG_38460U3 small nucleolar ribonucleoprotein subunit (Imp3), putative. (188 aa)
PDIG_73670RNA helicase. (602 aa)
PDIG_83330Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (431 aa)
PDIG_34510Uncharacterized protein. (515 aa)
PDIG_37730Exosome complex endonuclease 2/ribosomal RNA processing protein, putative. (324 aa)
PDIG_82900DNA-directed RNA polymerase subunit. (70 aa)
PDIG_40760Nucleolar RNAse III, putative. (233 aa)
PDIG_3406020S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (436 aa)
PDIG_36500Oxidoreductase, 2OG-Fe(II) oxygenase family, putative; Belongs to the iron/ascorbate-dependent oxidoreductase family. (348 aa)
PDIG_80980Cir_N domain-containing protein. (353 aa)
PDIG_34970Uncharacterized protein. (397 aa)
PDIG_713303' exoribonuclease family protein. (317 aa)
PDIG_38110DNA-directed RNA polymerase subunit. (113 aa)
PDIG_36230Nonsense-mediated mRNA decay protein Upf3, putative. (551 aa)
PDIG_34050H/ACA ribonucleoprotein complex subunit 3. (65 aa)
PDIG_70940WD repeat protein. (729 aa)
PDIG_69230ATP dependent RNA helicase (Dbp9), putative. (616 aa)
PDIG_69530DNA-directed RNA polymerase I and III subunit Rpc40, putative. (374 aa)
PDIG_27230Uncharacterized protein. (291 aa)
PDIG_25130DNA ligase. (974 aa)
PDIG_24850SRP9-21 domain-containing protein. (153 aa)
PDIG_24900rRNA processing protein (Ebp2), putative. (356 aa)
PDIG_75400SSU processome component Utp10, putative. (1804 aa)
PDIG_65370ATP dependent RNA helicase (Dbp8), putative; Belongs to the DEAD box helicase family. (520 aa)
PDIG_66470Uncharacterized protein. (220 aa)
PDIG_30840Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
PDIG_26150DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
PDIG_73320H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (207 aa)
PDIG_28730Uncharacterized protein. (363 aa)
PDIG_277203' exoribonuclease family protein. (387 aa)
PDIG_27250TGF-beta-inducible nuclear protein 1. (114 aa)
PDIG_26700Nucleolar protein 12. (526 aa)
PDIG_22840Chromosome segregation protein (Pcs1), putative. (534 aa)
PDIG_26180Ribonuclease P protein subunit. (242 aa)
PDIG_19960Exosome-associated family protein. (238 aa)
PDIG_62020Small nucleolar ribonucleoprotein complex subunit, putative. (943 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (815 aa)
PDIG_70270RNA methylase family protein, putative. (166 aa)
PDIG_18870WD repeat protein. (774 aa)
PDIG_21410Nucleolar protein nop5. (576 aa)
PDIG_69760Ribosome biogenesis protein (Bms1), putative. (1180 aa)
PDIG_18410RNA polymerase I subunit Rpa43, putative. (398 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (670 aa)
PDIG_58340rRNA processing protein Bystin, putative. (493 aa)
PDIG_19380Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. (1216 aa)
PDIG_14700Ribonuclease P complex subunit Pop2, putative. (312 aa)
PDIG_18550Ribosomal small subunit assembly protein, putative. (308 aa)
PDIG_66950rRNA processing protein Utp6, putative. (395 aa)
PDIG_56820U3 small nucleolar RNA-associated protein Utp11, putative. (307 aa)
PDIG_67100Exosome complex exonuclease Rrp6, putative. (754 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (395 aa)
PDIG_13840ATP-dependent RNA helicase DBP10. (912 aa)
PDIG_56240Uncharacterized protein. (1500 aa)
PDIG_67700Ribosome associated DnaJ chaperone Zuotin, putative. (451 aa)
PDIG_19110Uncharacterized protein. (504 aa)
PDIG_15830GTP binding protein, putative. (538 aa)
PDIG_1186060S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (184 aa)
PDIG_61560Nucleolar protein Jip5, putative. (407 aa)
PDIG_51950Uncharacterized protein. (268 aa)
PDIG_13640Nucleolar RNA methyltransferase (Nop2), putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (732 aa)
PDIG_10380Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (246 aa)
PDIG_60650Nuclear protein involved in pre-rRNA processing, putative. (330 aa)
PDIG_15510CCAAT-box-binding transcription factor. (860 aa)
PDIG_14570RNA-3'-phosphate cyclase family protein. (402 aa)
PDIG_14290G-patch RNA maturation protein (Gno1), putative. (284 aa)
PDIG_51600Small nucleolar ribonucleoprotein complex subunit Utp14, putatrive. (957 aa)
PDIG_51700SRP40_C domain-containing protein. (396 aa)
PDIG_59560DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (116 aa)
PDIG_57720DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1673 aa)
PDIG_07530Thioredoxin, putative. (564 aa)
PDIG_58570Sm domain-containing protein. (80 aa)
PDIG_58670Methyltransferase, putative. (280 aa)
PDIG_06880Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (735 aa)
PDIG_07230SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (573 aa)
PDIG_11700Uncharacterized protein. (329 aa)
PDIG_57390Uncharacterized protein. (234 aa)
PDIG_06780ATP dependent RNA helicase (Rok1), putative. (723 aa)
PDIG_10970Protein required for cell viability Rrp17, putative. (219 aa)
PDIG_47320Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (653 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
PDIG_05770WD_REPEATS_REGION domain-containing protein. (956 aa)
PDIG_05820rRNA processing protein, putative. (327 aa)
PDIG_07910ATP dependent RNA helicase, putative; Belongs to the DEAD box helicase family. (771 aa)
PDIG_02820Ribosomal biogenesis protein Gar2. (460 aa)
PDIG_07670Exosome complex subunit Csl4, putative. (246 aa)
PDIG_43370USP domain-containing protein. (185 aa)
PDIG_43720Uncharacterized protein. (643 aa)
PDIG_44120Small nucleolar ribonucleoprotein complex subunit, putative. (531 aa)
PDIG_54040WD_REPEATS_REGION domain-containing protein. (921 aa)
PDIG_07100DEAD/DEAH box helicase, putative. (809 aa)
PDIG_01110Small nucleolar ribonucleoprotein complex subunit, putative. (606 aa)
PDIG_42790AAA family ATPase/60S ribosome export protein Rix7, putative. (729 aa)
PDIG_05440Nucleolin protein Nsr1, putative. (537 aa)
PDIG_52080Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. (648 aa)
PDIG_06210KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (376 aa)
PDIG_06260Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. (506 aa)
PDIG_03250Uncharacterized protein. (974 aa)
PDIG_50630DNA-directed RNA polymerase I, II, and III subunit Rpb6. (153 aa)
PDIG_48920Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (221 aa)
PDIG_0103060S ribosome biogenesis protein Mak11, putative. (491 aa)
PDIG_47630rRNA maturation protein (Nop14), putative. (909 aa)
PDIG_46810tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family. (452 aa)
PDIG_46960Nucleolus protein required for cell viability, putative. (221 aa)
PDIG_00040Ribosome biogenesis protein, putative. (336 aa)
PDIG_34810Uncharacterized protein. (644 aa)
PDIG_3516040S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
PDIG_34680Uncharacterized protein. (308 aa)
PDIG_41470Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (406 aa)
PDIG_41010Uncharacterized protein. (659 aa)
PDIG_41210Metallothionein-I transcription activator. (71 aa)
PDIG_30500Uncharacterized protein. (291 aa)
PDIG_29120RNA polymerase I specific transcription initiation factor RRN3 superfamily. (692 aa)
PDIG_28540Ribosome biogenesis protein Rsa4, putative. (514 aa)
PDIG_2874060S ribosome biogenesis protein Brx1, putative. (361 aa)
PDIG_27260Uncharacterized protein. (222 aa)
PDIG_26560ATP dependent RNA helicase (Dbp7), putative; Belongs to the DEAD box helicase family. (772 aa)
PDIG_21300RNA helicase. (627 aa)
PDIG_20940Uncharacterized protein. (195 aa)
PDIG_29350Uncharacterized protein. (261 aa)
PDIG_28570SWIB domain-containing protein. (306 aa)
PDIG_19470Exosome complex exonuclease Rrp4, putative. (392 aa)
PDIG_27610Ribonuclease P complex subunit Pop1, putative. (880 aa)
PDIG_18390Uncharacterized protein. (1354 aa)
PDIG_15920PUM-HD domain-containing protein. (913 aa)
PDIG_14920Sas10/Utp3 family protein. (624 aa)
PDIG_15520Uncharacterized protein. (248 aa)
PDIG_13760RNA helicase. (808 aa)
PDIG_19620RNA processing protein Emg1, putative. (259 aa)
PDIG_01070Small nucleolar ribonucleoprotein complex subunit, putative. (972 aa)
PDIG_20020RNA binding protein. (332 aa)
PDIG_11060Topoisomerase family protein TRF4, putative. (714 aa)
PDIG_19250U3 small nucleolar RNA-associated protein 22. (1071 aa)
PDIG_19450RNA binding protein Rnp24, putative. (370 aa)
PDIG_18880DNA-directed RNA polymerases N/8 kDa subunit superfamily. (74 aa)
PDIG_07710Uncharacterized protein. (330 aa)
PDIG_15600Uncharacterized protein. (793 aa)
PDIG_12690Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family. (192 aa)
PDIG_11870Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (698 aa)
PDIG_12270Ribosome biogenesis protein (Rrb1), putative. (493 aa)
PDIG_06740Ribosome assembly protein Noc2, putative. (766 aa)
PDIG_01530ATP dependent RNA helicase (Dob1), putative. (1081 aa)
Your Current Organism:
Penicillium digitatum
NCBI taxonomy Id: 1170229
Other names: P. digitatum PHI26, Penicillium digitatum PHI26
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