26 items (Penicillium digitatum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PDIG_84050	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (369 aa)
	PDIG_82370	HEAT repeat protein (DRIM), putative. (2618 aa)
	PDIG_84360	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (714 aa)
	PDIG_64000	Ribosome biogenesis protein Kri1. (609 aa)
	PDIG_51110	Uncharacterized protein. (835 aa)
	PDIG_89440	Ribosome biogenesis protein Noc4, putative. (549 aa)
	PDIG_58530	SnoRNA binding protein, putative. (1031 aa)
	PDIG_78090	Imp4 protein, putative. (293 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (768 aa)
	PDIG_86220	Small nucleolar ribonucleoprotein complex subunit, putative. (616 aa)
	PDIG_38460	U3 small nucleolar ribonucleoprotein subunit (Imp3), putative. (188 aa)
	PDIG_62020	Small nucleolar ribonucleoprotein complex subunit, putative. (943 aa)
	PDIG_69760	Ribosome biogenesis protein (Bms1), putative. (1180 aa)
	PDIG_18550	Ribosomal small subunit assembly protein, putative. (308 aa)
	PDIG_66950	rRNA processing protein Utp6, putative. (395 aa)
	PDIG_14570	RNA-3'-phosphate cyclase family protein. (402 aa)
	PDIG_05770	WD_REPEATS_REGION domain-containing protein. (956 aa)
	PDIG_08130	Cellular morphogenesis protein (Bud22), putative. (445 aa)
	PDIG_54040	WD_REPEATS_REGION domain-containing protein. (921 aa)
	PDIG_47630	rRNA maturation protein (Nop14), putative. (909 aa)
	PDIG_41470	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (406 aa)
	PDIG_21300	RNA helicase. (627 aa)
	PDIG_19250	U3 small nucleolar RNA-associated protein 22. (1071 aa)
	PDIG_06740	Ribosome assembly protein Noc2, putative. (766 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (1329 aa)
	PDIG_01070	Small nucleolar ribonucleoprotein complex subunit, putative. (972 aa)

Your Current Organism:

Penicillium digitatum

NCBI taxonomy Id: 1170229
Other names: P. digitatum PHI26, Penicillium digitatum PHI26

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERB1	PDIG_01070	K9FU71	K9H3Q2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Small nucleolar ribonucleoprotein complex subunit, putative.	0.928
ERB1	PDIG_05770	K9FU71	K9GAW4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.942
ERB1	PDIG_06740	K9FU71	K9H1D8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome assembly protein Noc2, putative.	0.996
ERB1	PDIG_14570	K9FU71	K9G8X2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	RNA-3'-phosphate cyclase family protein.	0.705
ERB1	PDIG_18550	K9FU71	K9G6B0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosomal small subunit assembly protein, putative.	0.547
ERB1	PDIG_19250	K9FU71	K9GUE7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	U3 small nucleolar RNA-associated protein 22.	0.857
ERB1	PDIG_21300	K9FU71	K9GNH8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	RNA helicase.	0.979
ERB1	PDIG_38460	K9FU71	K9FWE4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	U3 small nucleolar ribonucleoprotein subunit (Imp3), putative.	0.608
ERB1	PDIG_47630	K9FU71	K9GF64	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	rRNA maturation protein (Nop14), putative.	0.862
ERB1	PDIG_51110	K9FU71	K9FNR0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.904
ERB1	PDIG_54040	K9FU71	K9GCF4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.925
ERB1	PDIG_58530	K9FU71	K9FP37	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	SnoRNA binding protein, putative.	0.921
ERB1	PDIG_62020	K9FU71	K9G3P0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Small nucleolar ribonucleoprotein complex subunit, putative.	0.819
ERB1	PDIG_64000	K9FU71	K9FHM4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein Kri1.	0.554
ERB1	PDIG_66950	K9FU71	K9G6H1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	rRNA processing protein Utp6, putative.	0.835
ERB1	PDIG_69760	K9FU71	K9G4L5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein (Bms1), putative.	0.877
ERB1	PDIG_78090	K9FU71	K9FU29	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Imp4 protein, putative.	0.838
ERB1	PDIG_82370	K9FU71	K9F8D7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	HEAT repeat protein (DRIM), putative.	0.754
ERB1	PDIG_84360	K9FU71	K9FB52	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.	0.719
ERB1	PDIG_86220	K9FU71	K9FUR2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Small nucleolar ribonucleoprotein complex subunit, putative.	0.957