13 items (Penicillium digitatum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PDIG_86410	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (404 aa)
	PDIG_82370	HEAT repeat protein (DRIM), putative. (2618 aa)
	PDIG_89440	Ribosome biogenesis protein Noc4, putative. (549 aa)
	PDIG_44130	Pre-rRNA processing protein Tsr1, putative. (803 aa)
	PDIG_34060	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (436 aa)
	PDIG_79090	Ribosomal RNA processing protein, putative. (314 aa)
	PDIG_25610	RIO1 family protein kinase, putative. (644 aa)
	PDIG_64480	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (264 aa)
	PDIG_58340	rRNA processing protein Bystin, putative. (493 aa)
	PDIG_54720	Low-temperature viability protein ltv1. (504 aa)
	PDIG_44120	Small nucleolar ribonucleoprotein complex subunit, putative. (531 aa)
	PDIG_06210	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (376 aa)
	PDIG_47630	rRNA maturation protein (Nop14), putative. (909 aa)

Your Current Organism:

Penicillium digitatum

NCBI taxonomy Id: 1170229
Other names: P. digitatum PHI26, Penicillium digitatum PHI26

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PDIG_06210	PDIG_25610	K9GDD0	K9G0H3	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	RIO1 family protein kinase, putative.	0.993
PDIG_06210	PDIG_34060	K9GDD0	K9FX44	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.	0.907
PDIG_06210	PDIG_44120	K9GDD0	K9GCA8	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Small nucleolar ribonucleoprotein complex subunit, putative.	0.999
PDIG_06210	PDIG_44130	K9GDD0	K9FTP1	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Pre-rRNA processing protein Tsr1, putative.	0.717
PDIG_06210	PDIG_47630	K9GDD0	K9GF64	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	rRNA maturation protein (Nop14), putative.	0.999
PDIG_06210	PDIG_54720	K9GDD0	K9GBY3	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Low-temperature viability protein ltv1.	0.993
PDIG_06210	PDIG_58340	K9GDD0	K9G5M4	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	rRNA processing protein Bystin, putative.	0.998
PDIG_06210	PDIG_64480	K9GDD0	K9G2D6	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	0.959
PDIG_06210	PDIG_79090	K9GDD0	K9FYL4	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Ribosomal RNA processing protein, putative.	0.925
PDIG_06210	PDIG_82370	K9GDD0	K9F8D7	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	HEAT repeat protein (DRIM), putative.	0.999
PDIG_06210	PDIG_86410	K9GDD0	K9F692	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.859
PDIG_06210	PDIG_89440	K9GDD0	K9FNY1	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Ribosome biogenesis protein Noc4, putative.	0.999
PDIG_25610	PDIG_06210	K9G0H3	K9GDD0	RIO1 family protein kinase, putative.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.993
PDIG_25610	PDIG_34060	K9G0H3	K9FX44	RIO1 family protein kinase, putative.	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.	0.999
PDIG_25610	PDIG_44120	K9G0H3	K9GCA8	RIO1 family protein kinase, putative.	Small nucleolar ribonucleoprotein complex subunit, putative.	0.457
PDIG_25610	PDIG_44130	K9G0H3	K9FTP1	RIO1 family protein kinase, putative.	Pre-rRNA processing protein Tsr1, putative.	0.998
PDIG_25610	PDIG_47630	K9G0H3	K9GF64	RIO1 family protein kinase, putative.	rRNA maturation protein (Nop14), putative.	0.826
PDIG_25610	PDIG_54720	K9G0H3	K9GBY3	RIO1 family protein kinase, putative.	Low-temperature viability protein ltv1.	0.999
PDIG_25610	PDIG_58340	K9G0H3	K9G5M4	RIO1 family protein kinase, putative.	rRNA processing protein Bystin, putative.	0.995
PDIG_25610	PDIG_64480	K9G0H3	K9G2D6	RIO1 family protein kinase, putative.	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	0.996