41 items (Penicillium digitatum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PDIG_71250	rRNA biogenesis protein RRP5, putative. (2158 aa)
	PDIG_58550	PINc domain-containing protein. (193 aa)
	PDIG_57320	Fibrillarin, putative. (357 aa)
	PDIG_59670	Small nucleolar ribonucleoprotein complex subunit (SOF1), putative. (447 aa)
	PDIG_51110	Uncharacterized protein. (835 aa)
	PDIG_51360	HMG box protein, putative. (299 aa)
	PDIG_89440	Ribosome biogenesis protein Noc4, putative. (549 aa)
	PDIG_58530	SnoRNA binding protein, putative. (1031 aa)
	PDIG_78090	Imp4 protein, putative. (293 aa)
	PDIG_45670	DEAH-box RNA helicase (Dhr1), putative. (1211 aa)
	PDIG_86220	Small nucleolar ribonucleoprotein complex subunit, putative. (616 aa)
	PDIG_38460	U3 small nucleolar ribonucleoprotein subunit (Imp3), putative. (188 aa)
	PDIG_70940	WD repeat protein. (729 aa)
	PDIG_30840	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
	PDIG_62020	Small nucleolar ribonucleoprotein complex subunit, putative. (943 aa)
	PDIG_18870	WD repeat protein. (774 aa)
	PDIG_21410	Nucleolar protein nop5. (576 aa)
	PDIG_66950	rRNA processing protein Utp6, putative. (395 aa)
	PDIG_56820	U3 small nucleolar RNA-associated protein Utp11, putative. (307 aa)
	PDIG_17460	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (260 aa)
	PDIG_51600	Small nucleolar ribonucleoprotein complex subunit Utp14, putatrive. (957 aa)
	PDIG_05770	WD_REPEATS_REGION domain-containing protein. (956 aa)
	PDIG_05820	rRNA processing protein, putative. (327 aa)
	PDIG_44120	Small nucleolar ribonucleoprotein complex subunit, putative. (531 aa)
	PDIG_54040	WD_REPEATS_REGION domain-containing protein. (921 aa)
	PDIG_01110	Small nucleolar ribonucleoprotein complex subunit, putative. (606 aa)
	PDIG_06210	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (376 aa)
	PDIG_47630	rRNA maturation protein (Nop14), putative. (909 aa)
	PDIG_14920	Sas10/Utp3 family protein. (624 aa)
	PDIG_13760	RNA helicase. (808 aa)
	PDIG_19250	U3 small nucleolar RNA-associated protein 22. (1071 aa)
	PDIG_03630	HAD_SAK_1 domain-containing protein. (575 aa)
	PDIG_01070	Small nucleolar ribonucleoprotein complex subunit, putative. (972 aa)
	PDIG_66810	Pre-rRNA processing nucleolar protein Sik1, putative. (514 aa)
	PDIG_65560	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (253 aa)
	PDIG_59740	ATP-dependent RNA helicase, putative; Belongs to the DEAD box helicase family. (494 aa)
	PDIG_84050	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (369 aa)
	PDIG_90660	Small nucleolar ribonucleoprotein complex subunit Utp15, putative. (542 aa)
	PDIG_82370	HEAT repeat protein (DRIM), putative. (2618 aa)
	PDIG_84360	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (714 aa)
	PDIG_76060	U3 small nucleolar ribonucleoprotein Lcp5, putative. (379 aa)

Your Current Organism:

Penicillium digitatum

NCBI taxonomy Id: 1170229
Other names: P. digitatum PHI26, Penicillium digitatum PHI26

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PDIG_01070	PDIG_01110	K9H3Q2	K9GCS0	Small nucleolar ribonucleoprotein complex subunit, putative.	Small nucleolar ribonucleoprotein complex subunit, putative.	0.997
PDIG_01070	PDIG_05770	K9H3Q2	K9GAW4	Small nucleolar ribonucleoprotein complex subunit, putative.	WD_REPEATS_REGION domain-containing protein.	0.999
PDIG_01070	PDIG_05820	K9H3Q2	K9GAX0	Small nucleolar ribonucleoprotein complex subunit, putative.	rRNA processing protein, putative.	0.650
PDIG_01070	PDIG_06210	K9H3Q2	K9GDD0	Small nucleolar ribonucleoprotein complex subunit, putative.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.995
PDIG_01070	PDIG_13760	K9H3Q2	K9GSS1	Small nucleolar ribonucleoprotein complex subunit, putative.	RNA helicase.	0.848
PDIG_01070	PDIG_14920	K9H3Q2	K9GRX9	Small nucleolar ribonucleoprotein complex subunit, putative.	Sas10/Utp3 family protein.	0.978
PDIG_01070	PDIG_17460	K9H3Q2	K9G7S1	Small nucleolar ribonucleoprotein complex subunit, putative.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.795
PDIG_01070	PDIG_18870	K9H3Q2	K9G4A8	Small nucleolar ribonucleoprotein complex subunit, putative.	WD repeat protein.	0.998
PDIG_01070	PDIG_19250	K9H3Q2	K9GUE7	Small nucleolar ribonucleoprotein complex subunit, putative.	U3 small nucleolar RNA-associated protein 22.	0.999
PDIG_01070	PDIG_21410	K9H3Q2	K9G4G2	Small nucleolar ribonucleoprotein complex subunit, putative.	Nucleolar protein nop5.	0.998
PDIG_01070	PDIG_30840	K9H3Q2	K9G1P8	Small nucleolar ribonucleoprotein complex subunit, putative.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.977
PDIG_01070	PDIG_38460	K9H3Q2	K9FWE4	Small nucleolar ribonucleoprotein complex subunit, putative.	U3 small nucleolar ribonucleoprotein subunit (Imp3), putative.	0.992
PDIG_01070	PDIG_44120	K9H3Q2	K9GCA8	Small nucleolar ribonucleoprotein complex subunit, putative.	Small nucleolar ribonucleoprotein complex subunit, putative.	0.998
PDIG_01070	PDIG_45670	K9H3Q2	K9FUM5	Small nucleolar ribonucleoprotein complex subunit, putative.	DEAH-box RNA helicase (Dhr1), putative.	0.973
PDIG_01070	PDIG_47630	K9H3Q2	K9GF64	Small nucleolar ribonucleoprotein complex subunit, putative.	rRNA maturation protein (Nop14), putative.	0.995
PDIG_01070	PDIG_51110	K9H3Q2	K9FNR0	Small nucleolar ribonucleoprotein complex subunit, putative.	Uncharacterized protein.	0.820
PDIG_01070	PDIG_51600	K9H3Q2	K9G902	Small nucleolar ribonucleoprotein complex subunit, putative.	Small nucleolar ribonucleoprotein complex subunit Utp14, putatrive.	0.996
PDIG_01070	PDIG_54040	K9H3Q2	K9GCF4	Small nucleolar ribonucleoprotein complex subunit, putative.	WD_REPEATS_REGION domain-containing protein.	0.999
PDIG_01070	PDIG_56820	K9H3Q2	K9G6I4	Small nucleolar ribonucleoprotein complex subunit, putative.	U3 small nucleolar RNA-associated protein Utp11, putative.	0.983
PDIG_01070	PDIG_57320	K9H3Q2	K9FM43	Small nucleolar ribonucleoprotein complex subunit, putative.	Fibrillarin, putative.	0.995