STRINGSTRING
PDIG_18870 PDIG_18870 PDIG_01070 PDIG_01070 RPS0 RPS0 PDIG_14920 PDIG_14920 PDIG_25920 PDIG_25920 PDIG_30100 PDIG_30100 PDIG_29800 PDIG_29800 PDIG_29520 PDIG_29520 PDIG_41010 PDIG_41010 PDIG_34680 PDIG_34680 PDIG_35160 PDIG_35160 PDIG_46960 PDIG_46960 PDIG_47630 PDIG_47630 PDIG_48970 PDIG_48970 PDIG_48920 PDIG_48920 PDIG_51630 PDIG_51630 PDIG_06210 PDIG_06210 PDIG_01110 PDIG_01110 PDIG_06870 PDIG_06870 PDIG_54040 PDIG_54040 PDIG_44120 PDIG_44120 PDIG_54720 PDIG_54720 PDIG_09130 PDIG_09130 PDIG_08130 PDIG_08130 PDIG_04500 PDIG_04500 PDIG_05770 PDIG_05770 PDIG_06780 PDIG_06780 PDIG_58670 PDIG_58670 PDIG_58570 PDIG_58570 PDIG_12350 PDIG_12350 PDIG_51600 PDIG_51600 PDIG_14570 PDIG_14570 PDIG_66950 PDIG_66950 PDIG_66650 PDIG_66650 PDIG_18550 PDIG_18550 PDIG_58590 PDIG_58590 PDIG_58340 PDIG_58340 PDIG_69760 PDIG_69760 PDIG_21410 PDIG_21410 PDIG_20010 PDIG_20010 PDIG_62020 PDIG_62020 PDIG_63930 PDIG_63930 PDIG_30840 PDIG_30840 PDIG_74450 PDIG_74450 PDIG_25610 PDIG_25610 PDIG_70940 PDIG_70940 PDIG_32740 PDIG_32740 PDIG_34060 PDIG_34060 PDIG_41020 PDIG_41020 NAT10 NAT10 PDIG_86100 PDIG_86100 PDIG_44600 PDIG_44600 PDIG_45670 PDIG_45670 PDIG_44130 PDIG_44130 PDIG_90980 PDIG_90980 PDIG_44880 PDIG_44880 PDIG_50270 PDIG_50270 PDIG_89440 PDIG_89440 PDIG_51110 PDIG_51110 PDIG_59670 PDIG_59670 PDIG_58550 PDIG_58550 TSR3 TSR3 PDIG_57280 PDIG_57280 PDIG_58710 PDIG_58710 PDIG_65560 PDIG_65560 PDIG_59740 PDIG_59740 PDIG_63320 PDIG_63320 PDIG_64000 PDIG_64000 PDIG_71250 PDIG_71250 PDIG_76060 PDIG_76060 PDIG_84360 PDIG_84360 PDIG_90660 PDIG_90660 PDIG_86910 PDIG_86910 PDIG_86410 PDIG_86410
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PDIG_18870WD repeat protein. (774 aa)
PDIG_01070Small nucleolar ribonucleoprotein complex subunit, putative. (972 aa)
RPS040S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (302 aa)
PDIG_14920Sas10/Utp3 family protein. (624 aa)
PDIG_25920Ribosomal protein S19, putative; Belongs to the universal ribosomal protein uS19 family. (94 aa)
PDIG_3010040S ribosomal protein S15, putative; Belongs to the universal ribosomal protein uS19 family. (153 aa)
PDIG_2980040S ribosomal protein S14 (CRP2); Belongs to the universal ribosomal protein uS11 family. (151 aa)
PDIG_2952040S ribosomal protein Rps16, putative; Belongs to the universal ribosomal protein uS9 family. (143 aa)
PDIG_41010Uncharacterized protein. (659 aa)
PDIG_34680Uncharacterized protein. (308 aa)
PDIG_3516040S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
PDIG_46960Nucleolus protein required for cell viability, putative. (221 aa)
PDIG_47630rRNA maturation protein (Nop14), putative. (909 aa)
PDIG_48970Ribosomal protein S28e. (68 aa)
PDIG_48920Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (221 aa)
PDIG_5163040S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (584 aa)
PDIG_06210KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (376 aa)
PDIG_01110Small nucleolar ribonucleoprotein complex subunit, putative. (606 aa)
PDIG_0687040S ribosomal protein S5, putative; Belongs to the universal ribosomal protein uS7 family. (211 aa)
PDIG_54040WD_REPEATS_REGION domain-containing protein. (921 aa)
PDIG_44120Small nucleolar ribonucleoprotein complex subunit, putative. (531 aa)
PDIG_54720Low-temperature viability protein ltv1. (504 aa)
PDIG_09130Pre-rRNA processing protein, putative. (187 aa)
PDIG_08130Cellular morphogenesis protein (Bud22), putative. (445 aa)
PDIG_0450040S ribosomal protein S27. (82 aa)
PDIG_05770WD_REPEATS_REGION domain-containing protein. (956 aa)
PDIG_06780ATP dependent RNA helicase (Rok1), putative. (723 aa)
PDIG_58670Methyltransferase, putative. (280 aa)
PDIG_58570Sm domain-containing protein. (80 aa)
PDIG_12350Uncharacterized protein. (930 aa)
PDIG_51600Small nucleolar ribonucleoprotein complex subunit Utp14, putatrive. (957 aa)
PDIG_14570RNA-3'-phosphate cyclase family protein. (402 aa)
PDIG_66950rRNA processing protein Utp6, putative. (395 aa)
PDIG_66650PDCD2_C domain-containing protein. (417 aa)
PDIG_18550Ribosomal small subunit assembly protein, putative. (308 aa)
PDIG_58590AdoMet-dependent tRNA methyltransferase (MTase) complex subunit, putative. (128 aa)
PDIG_58340rRNA processing protein Bystin, putative. (493 aa)
PDIG_69760Ribosome biogenesis protein (Bms1), putative. (1180 aa)
PDIG_21410Nucleolar protein nop5. (576 aa)
PDIG_20010Uncharacterized protein. (274 aa)
PDIG_62020Small nucleolar ribonucleoprotein complex subunit, putative. (943 aa)
PDIG_63930TYR_PHOSPHATASE_2 domain-containing protein. (903 aa)
PDIG_30840Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
PDIG_74450Uncharacterized protein. (512 aa)
PDIG_25610RIO1 family protein kinase, putative. (644 aa)
PDIG_70940WD repeat protein. (729 aa)
PDIG_32740Leucine permease transcriptional regulator (SAC3), putative. (1458 aa)
PDIG_3406020S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (436 aa)
PDIG_41020Uncharacterized protein. (63 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1035 aa)
PDIG_86100Protein bfr2. (525 aa)
PDIG_44600Pre-rRNA processing protein Rrp12, putative. (1259 aa)
PDIG_45670DEAH-box RNA helicase (Dhr1), putative. (1211 aa)
PDIG_44130Pre-rRNA processing protein Tsr1, putative. (803 aa)
PDIG_90980Nuclear protein (Sgd1), putative. (884 aa)
PDIG_44880mRNA-nucleus export ATPase (Elf1), putative. (1117 aa)
PDIG_50270ATP-dependent RNA helicase (Hrh1), putative. (809 aa)
PDIG_89440Ribosome biogenesis protein Noc4, putative. (549 aa)
PDIG_51110Uncharacterized protein. (835 aa)
PDIG_59670Small nucleolar ribonucleoprotein complex subunit (SOF1), putative. (447 aa)
PDIG_58550PINc domain-containing protein. (193 aa)
TSR3Ribosome biogenesis protein TSR3; Ribosome biogenesis protein required for processing 35S pre- rRNA at site D; Belongs to the TSR3 family. (369 aa)
PDIG_57280Small nuclear ribonucleoprotein (LSM7), putative. (125 aa)
PDIG_58710Pre-rRNA-processing protein pno1. (255 aa)
PDIG_6556040S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (253 aa)
PDIG_59740ATP-dependent RNA helicase, putative; Belongs to the DEAD box helicase family. (494 aa)
PDIG_6332060S ribosome biogenesis protein Rrp14, putative. (689 aa)
PDIG_64000Ribosome biogenesis protein Kri1. (609 aa)
PDIG_71250rRNA biogenesis protein RRP5, putative. (2158 aa)
PDIG_76060U3 small nucleolar ribonucleoprotein Lcp5, putative. (379 aa)
PDIG_84360U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (714 aa)
PDIG_90660Small nucleolar ribonucleoprotein complex subunit Utp15, putative. (542 aa)
PDIG_86910Utp12 domain-containing protein. (833 aa)
PDIG_86410rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (404 aa)
Your Current Organism:
Penicillium digitatum
NCBI taxonomy Id: 1170229
Other names: P. digitatum PHI26, Penicillium digitatum PHI26
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