20 items (Penicillium digitatum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PDIG_03380	Pectin lyase B. (373 aa)
	PDIG_83980	Chloride channel protein. (1119 aa)
	PDIG_81440	Ubiquitin. (154 aa)
	PDIG_68320	Plasma membrane channel protein (Aqy1), putative. (736 aa)
	PDIG_67910	Plasma membrane stress response protein (Ist2), putative. (1217 aa)
	PDIG_48290	Chloride channel protein. (859 aa)
	PDIG_84220	Cyclin dependent kinase inhibitor Pho81, putative. (1050 aa)
	PDIG_50490	Vacuolar transporter chaperone (Vtc4), putative. (800 aa)
	PDIG_48410	Pectin lyase, putative. (371 aa)
	PDIG_43610	GYF domain-containing protein. (1478 aa)
	PDIG_84060	BZIP domain-containing protein. (246 aa)
	PDIG_70390	Uncharacterized protein. (558 aa)
	PDIG_18010	Uncharacterized protein. (814 aa)
	PDIG_21460	PHB domain-containing protein. (345 aa)
	PDIG_65300	Uncharacterized protein. (275 aa)
	PDIG_08860	Zn(2)-C6 fungal-type domain-containing protein. (200 aa)
	PDIG_46160	Uncharacterized protein. (401 aa)
	PDIG_37700	Chloride channel protein. (908 aa)
	PDIG_25770	Glycerophosphocholine phosphodiesterase Gde1, putative. (1201 aa)
	PDIG_15970	Uncharacterized protein. (375 aa)

Your Current Organism:

Penicillium digitatum

NCBI taxonomy Id: 1170229
Other names: P. digitatum PHI26, Penicillium digitatum PHI26

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PDIG_03380	PDIG_08860	K9GXH3	K9GBN8	Pectin lyase B.	Zn(2)-C6 fungal-type domain-containing protein.	0.558
PDIG_03380	PDIG_65300	K9GXH3	K9G5Y7	Pectin lyase B.	Uncharacterized protein.	0.665
PDIG_03380	PDIG_81440	K9GXH3	K9FCW0	Pectin lyase B.	Ubiquitin.	0.650
PDIG_03380	PDIG_84060	K9GXH3	K9FW55	Pectin lyase B.	BZIP domain-containing protein.	0.650
PDIG_08860	PDIG_03380	K9GBN8	K9GXH3	Zn(2)-C6 fungal-type domain-containing protein.	Pectin lyase B.	0.558
PDIG_08860	PDIG_25770	K9GBN8	K9GQU1	Zn(2)-C6 fungal-type domain-containing protein.	Glycerophosphocholine phosphodiesterase Gde1, putative.	0.564
PDIG_08860	PDIG_48410	K9GBN8	K9FTJ5	Zn(2)-C6 fungal-type domain-containing protein.	Pectin lyase, putative.	0.558
PDIG_08860	PDIG_65300	K9GBN8	K9G5Y7	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.733
PDIG_08860	PDIG_84220	K9GBN8	K9FRC0	Zn(2)-C6 fungal-type domain-containing protein.	Cyclin dependent kinase inhibitor Pho81, putative.	0.605
PDIG_15970	PDIG_18010	K9GRP0	K9G4N4	Uncharacterized protein.	Uncharacterized protein.	0.727
PDIG_18010	PDIG_15970	K9G4N4	K9GRP0	Uncharacterized protein.	Uncharacterized protein.	0.727
PDIG_21460	PDIG_25770	K9G5F0	K9GQU1	PHB domain-containing protein.	Glycerophosphocholine phosphodiesterase Gde1, putative.	0.489
PDIG_21460	PDIG_84220	K9G5F0	K9FRC0	PHB domain-containing protein.	Cyclin dependent kinase inhibitor Pho81, putative.	0.445
PDIG_25770	PDIG_08860	K9GQU1	K9GBN8	Glycerophosphocholine phosphodiesterase Gde1, putative.	Zn(2)-C6 fungal-type domain-containing protein.	0.564
PDIG_25770	PDIG_21460	K9GQU1	K9G5F0	Glycerophosphocholine phosphodiesterase Gde1, putative.	PHB domain-containing protein.	0.489
PDIG_25770	PDIG_46160	K9GQU1	K9GGC9	Glycerophosphocholine phosphodiesterase Gde1, putative.	Uncharacterized protein.	0.400
PDIG_25770	PDIG_50490	K9GQU1	K9FSJ9	Glycerophosphocholine phosphodiesterase Gde1, putative.	Vacuolar transporter chaperone (Vtc4), putative.	0.758
PDIG_25770	PDIG_70390	K9GQU1	K9FZ70	Glycerophosphocholine phosphodiesterase Gde1, putative.	Uncharacterized protein.	0.400
PDIG_25770	PDIG_81440	K9GQU1	K9FCW0	Glycerophosphocholine phosphodiesterase Gde1, putative.	Ubiquitin.	0.649
PDIG_25770	PDIG_84060	K9GQU1	K9FW55	Glycerophosphocholine phosphodiesterase Gde1, putative.	BZIP domain-containing protein.	0.649