34 items (Penicillium digitatum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PDIG_11570	Vacuolar sorting protein SNF7 family protein, putative. (489 aa)
	PDIG_87370	Peptidase S59 domain-containing protein. (1999 aa)
	PDIG_85210	Non-repetitive nucleoporin, putative. (1375 aa)
	PDIG_84440	Nuclear pore complex subunit Nup133, putative. (1326 aa)
	PDIG_78930	Ubiquitin-like modifier SUMO, putative. (167 aa)
	PDIG_78060	Nucleoporin (Nup184), putative. (1814 aa)
	PDIG_77820	Tubulin subunit TubB; Belongs to the tubulin family. (175 aa)
	PDIG_75280	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (213 aa)
	PDIG_74630	Magnesium dependent phosphatase, putative. (213 aa)
	PDIG_70180	Sister chromatid separation protein (Src1), putative. (728 aa)
	PDIG_66710	Vacuolar sorting ATPase Vps4, putative; Belongs to the AAA ATPase family. (449 aa)
	PDIG_57630	DUF292 domain protein. (397 aa)
	PDIG_48820	Nuclear pore complex subunit Nup192, putative. (1665 aa)
	PDIG_44090	Mitochondrial AAA ATPase, putative. (952 aa)
	PDIG_79010	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (436 aa)
	PDIG_42000	Uncharacterized protein. (1326 aa)
	PDIG_42780	SNF7 family protein. (200 aa)
	PDIG_72990	AAA family ATPase, putative; Belongs to the AAA ATPase family. (828 aa)
	PDIG_78940	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1043 aa)
	PDIG_29060	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (486 aa)
	PDIG_64380	C-14 sterol reductase. (496 aa)
	PDIG_22440	Nuclear pore protein (Nic96), putative. (1052 aa)
	PDIG_59890	SNF7 family protein. (221 aa)
	PDIG_22420	Ran exchange factor Prp20/Pim1, putative. (545 aa)
	PDIG_55880	Importin beta-1 subunit. (869 aa)
	PDIG_61560	Nucleolar protein Jip5, putative. (407 aa)
	PDIG_07500	Uncharacterized protein. (232 aa)
	PDIG_05410	Ran GTPase activating protein 1 (RNA1 protein). (418 aa)
	PDIG_03470	ELYS domain-containing protein. (309 aa)
	PDIG_01910	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (149 aa)
	PDIG_12790	Nucleoporin NUP49/NSP49, putative. (482 aa)
	PDIG_01600	Nuclear envelope protein, putative. (581 aa)
	PDIG_10440	SNF7 family protein. (223 aa)
	PDIG_06030	Nuclear pore protein (SEH1), putative; Belongs to the WD repeat SEC13 family. (386 aa)

Your Current Organism:

Penicillium digitatum

NCBI taxonomy Id: 1170229
Other names: P. digitatum PHI26, Penicillium digitatum PHI26

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PDIG_01600	PDIG_01910	K9GYI7	K9GEZ2	Nuclear envelope protein, putative.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.461
PDIG_01600	PDIG_12790	K9GYI7	K9GY77	Nuclear envelope protein, putative.	Nucleoporin NUP49/NSP49, putative.	0.405
PDIG_01600	PDIG_22440	K9GYI7	K9G3I2	Nuclear envelope protein, putative.	Nuclear pore protein (Nic96), putative.	0.538
PDIG_01600	PDIG_29060	K9GYI7	K9FZ91	Nuclear envelope protein, putative.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.481
PDIG_01600	PDIG_42000	K9GYI7	K9FUF7	Nuclear envelope protein, putative.	Uncharacterized protein.	0.447
PDIG_01600	PDIG_48820	K9GYI7	K9FPY6	Nuclear envelope protein, putative.	Nuclear pore complex subunit Nup192, putative.	0.599
PDIG_01600	PDIG_77820	K9GYI7	K9FAJ9	Nuclear envelope protein, putative.	Tubulin subunit TubB; Belongs to the tubulin family.	0.481
PDIG_01600	PDIG_78060	K9GYI7	K9F9W5	Nuclear envelope protein, putative.	Nucleoporin (Nup184), putative.	0.784
PDIG_01600	PDIG_78930	K9GYI7	K9F9J7	Nuclear envelope protein, putative.	Ubiquitin-like modifier SUMO, putative.	0.486
PDIG_01600	PDIG_78940	K9GYI7	K9FYJ8	Nuclear envelope protein, putative.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.548
PDIG_01600	PDIG_79010	K9GYI7	K9FTK1	Nuclear envelope protein, putative.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.512
PDIG_01600	PDIG_85210	K9GYI7	K9F6S2	Nuclear envelope protein, putative.	Non-repetitive nucleoporin, putative.	0.591
PDIG_01600	PDIG_87370	K9GYI7	K9F5U4	Nuclear envelope protein, putative.	Peptidase S59 domain-containing protein.	0.746
PDIG_01910	PDIG_01600	K9GEZ2	K9GYI7	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Nuclear envelope protein, putative.	0.461
PDIG_01910	PDIG_05410	K9GEZ2	K9GD57	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Ran GTPase activating protein 1 (RNA1 protein).	0.999
PDIG_01910	PDIG_06030	K9GEZ2	K9H1T0	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Nuclear pore protein (SEH1), putative; Belongs to the WD repeat SEC13 family.	0.800
PDIG_01910	PDIG_12790	K9GEZ2	K9GY77	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Nucleoporin NUP49/NSP49, putative.	0.745
PDIG_01910	PDIG_22420	K9GEZ2	K9G4S0	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Ran exchange factor Prp20/Pim1, putative.	0.741
PDIG_01910	PDIG_22440	K9GEZ2	K9G3I2	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Nuclear pore protein (Nic96), putative.	0.835
PDIG_01910	PDIG_48820	K9GEZ2	K9FPY6	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Nuclear pore complex subunit Nup192, putative.	0.804