STRINGSTRING
rnhB rnhB AFZ28817.1 AFZ28817.1 AFZ28859.1 AFZ28859.1 AFZ29380.1 AFZ29380.1 AFZ29422.1 AFZ29422.1 xseB xseB xseA xseA deoC deoC AFZ29669.1 AFZ29669.1 surE surE rph rph AFZ30302.1 AFZ30302.1 pnp pnp AFZ30859.1 AFZ30859.1 nudC nudC rnhA rnhA AFZ31596.1 AFZ31596.1 AFZ31617.1 AFZ31617.1 AFZ31751.1 AFZ31751.1 AFZ31784.1 AFZ31784.1 AFZ31805.1 AFZ31805.1 AFZ32397.1 AFZ32397.1 AFZ32761.1 AFZ32761.1 AFZ32857.1 AFZ32857.1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
rnhBRNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (217 aa)
AFZ28817.1PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; COGs: COG0590 Cytosine/adenosine deaminase; InterPro IPR002125; KEGG: npu:Npun_R2274 CMP/dCMP deaminase, zinc-binding; PFAM: CMP/dCMP deaminase, zinc-binding; SPTR: Cytidine/deoxycytidylate deaminase, zinc-binding region. (141 aa)
AFZ28859.15'-nucleotidase; PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE; COGs: COG0496 acid phosphatase; InterPro IPR002828; KEGG: npu:Npun_R1763 stationary phase survival protein SurE; PFAM: Survival protein SurE-like phosphatase/nucleotidase; SPTR: Stationary-phase survival protein SurE; TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase. (225 aa)
AFZ29380.1PFAM: Alkaline phosphatase; Hemolysin-type calcium-binding repeat (2 copies); COGs: COG1785 Alkaline phosphatase; InterPro IPR001952:IPR001343; KEGG: cyt:cce_3494 glycerophosphoryl diester phosphodiesterase; PFAM: Alkaline phosphatase; Haemolysin-type calcium-binding repeat; SMART: Alkaline phosphatase; SPTR: Alkaline phosphatase; Belongs to the alkaline phosphatase family. (1118 aa)
AFZ29422.1KEGG: npu:Npun_F0077 hypothetical protein; SPTR: Putative uncharacterized protein. (269 aa)
xseBExodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (84 aa)
xseAExodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (409 aa)
deoCDeoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. (231 aa)
AFZ29669.13-phytase; PFAM: Phytase; COGs: COG4247 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase); InterPro IPR005135:IPR003431:IPR001343; KEGG: cyt:cce_3495 phytase; PFAM: Phytase; Endonuclease/exonuclease/phosphatase; Haemolysin-type calcium-binding repeat; PRIAM: 3-phytase; SPTR: Phytase. (1406 aa)
surE5'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. (277 aa)
rphRibonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. (244 aa)
AFZ30302.1PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative; COGs: COG0232 dGTP triphosphohydrolase; InterPro IPR003607:IPR006261; KEGG: syn:sll0398 dGTP triphosphohydrolase; PRIAM: dGTPase; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: Deoxyguanosinetriphosphate triphosphohydrolase-like protein; TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase. (448 aa)
pnpPolyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. (719 aa)
AFZ30859.1COGs: COG4222 conserved hypothetical protein; KEGG: ava:Ava_4864 hypothetical protein; SPTR: Putative uncharacterized protein. (378 aa)
nudCPFAM: NADH pyrophosphatase zinc ribbon domain; NUDIX domain; NADH pyrophosphatase-like rudimentary NUDIX domain; COGs: COG2816 NTP pyrophosphohydrolase containing a Zn-finger probably nucleic-acid-binding; HAMAP: NADH pyrophosphatase; InterPro IPR015375:IPR015376:IPR000086; KEGG: mba:Mbar_A2829 phosphohydrolase; PFAM: NUDIX hydrolase domain; NADH pyrophosphatase-like, N-terminal; Zinc ribbon, NADH pyrophosphatase; PRIAM: NAD(+) diphosphatase; SPTR: NADH pyrophosphatase-like rudimentary NUDIX domain family; Belongs to the Nudix hydrolase family. NudC subfamily. (272 aa)
rnhARibonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (297 aa)
AFZ31596.1Addiction module toxin, Txe/YoeB family; PFAM: Plasmid encoded toxin Txe; TIGRFAM: toxin-antitoxin system, toxin component, Txe/YoeB family; COGs: COG4115 conserved hypothetical protein; InterPro IPR009614; KEGG: cyt:cce_0050 putative addiction module toxin, Txe/YoeB; PFAM: Addiction module toxin, Txe/YoeB; SPTR: Putative addiction module toxin, Txe/YoeB; TIGRFAM: Addiction module toxin, Txe/YoeB; manually curated. (90 aa)
AFZ31617.1Nucleoside-triphosphatase rdgB; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. (200 aa)
AFZ31751.1PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; COGs: COG0295 Cytidine deaminase; InterPro IPR002125; KEGG: sta:STHERM_c14570 hypothetical protein; PFAM: CMP/dCMP deaminase, zinc-binding; SPTR: Cytidine deaminase. (124 aa)
AFZ31784.1MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein; COGs: COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain; InterPro IPR004518:IPR011551; KEGG: ava:Ava_2914 nucleoside triphosphate pyrophosphohydrolase; PFAM: NTP pyrophosphohydrolase MazG, putative catalytic core; SPTR: MazG; TIGRFAM: NTP pyrophosphohydrolase MazG, bacterial. (286 aa)
AFZ31805.1PFAM: Glycerophosphoryl diester phosphodiesterase family; Hemolysin-type calcium-binding repeat (2 copies); COGs: COG4222 conserved hypothetical protein; InterPro IPR001343:IPR004129; KEGG: cyc:PCC7424_0695 glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase; Haemolysin-type calcium-binding repeat; SPTR: Glycerophosphoryl diester phosphodiesterase. (924 aa)
AFZ32397.1PFAM: 5'-nucleotidase, C-terminal domain; Hemolysin-type calcium-binding repeat (2 copies); COGs: COG0737 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase; InterPro IPR008334:IPR001343; KEGG: syf:Synpcc7942_1392 alkaline phosphatase; PFAM: 5'-Nucleotidase, C-terminal; Haemolysin-type calcium-binding repeat; PRIAM: 5'-nucleotidase; SPTR: Alkaline phosphatase. (1339 aa)
AFZ32761.1PFAM: Phosphorylase superfamily; COGs: COG0775 Nucleoside phosphorylase; InterPro IPR000845; KEGG: vap:Vapar_2659 adenosylhomocysteine nucleosidase; PFAM: Nucleoside phosphorylase; SPTR: Adenosylhomocysteine nucleosidase. (415 aa)
AFZ32857.1Endonuclease/exonuclease/phosphatase; PFAM: Hemolysin-type calcium-binding repeat (2 copies); Endonuclease/Exonuclease/phosphatase family; COGs: COG2374 extracellular nuclease; InterPro IPR005135:IPR001343; KEGG: cyc:PCC7424_0398 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; Haemolysin-type calcium-binding repeat; SPTR: Endonuclease/exonuclease/phosphatase. (1003 aa)
Your Current Organism:
Gloeocapsa sp. PCC7428
NCBI taxonomy Id: 1173026
Other names: Chroococcus sp. Cey un, G. sp. PCC 7428, Gloeocapsa sp. ATCC 29159, Gloeocapsa sp. PCC 7428
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