STRINGSTRING
AFZ32596.1 AFZ32596.1 AFZ30661.1 AFZ30661.1 AFZ30706.1 AFZ30706.1 AFZ30755.1 AFZ30755.1 AFZ30707.1 AFZ30707.1 AFZ30708.1 AFZ30708.1 psbB psbB AFZ32113.1 AFZ32113.1 psbC psbC petD petD psbA-3 psbA-3 AFZ31352.1 AFZ31352.1 psbD psbD AFZ28836.1 AFZ28836.1 psbA psbA psbA-2 psbA-2 AFZ30177.1 AFZ30177.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AFZ32596.1Photosystem Q(B) protein; PFAM: Photosynthetic reaction centre protein; TIGRFAM: photosystem II, DI subunit (also called Q(B)); HAMAP: Photosystem II reaction centre protein PsbA/D1; InterPro IPR000484:IPR005867; KEGG: syf:Synpcc7942_1389 photosystem q(b) protein; PFAM: Photosynthetic reaction centre, L/M; SPTR: Photosystem Q(B) protein 2; TIGRFAM: Photosystem II reaction centre protein PsbA/D1. (360 aa)
AFZ30661.1PFAM: PRC-barrel domain; COGs: COG3861 conserved hypothetical protein; InterPro IPR007903; KEGG: ana:alr5332 hypothetical protein; PFAM: PRC-barrel; SPTR: Alr5332 protein. (167 aa)
AFZ30706.1Hypothetical protein; PFAM: Domain of unknown function (DUF2382); PRC-barrel domain; TIGRFAM: conserved domain; COGs: COG3861 conserved hypothetical protein; InterPro IPR007903:IPR019060:IPR011756; KEGG: npu:Npun_F5451 PRC-barrel domain-containing protein; PFAM: Domain of unknown function DUF2382, C-terminal; PRC-barrel; SPTR: PRC-barrel domain protein; TIGRFAM: Conserved hypothetical protein CHP02271, C-terminal. (288 aa)
AFZ30755.1Photosystem II D2 protein; PFAM: Photosynthetic reaction centre protein; TIGRFAM: Photosystem II, DII subunit (also called Q(A)); HAMAP: Photosystem II reaction centre protein PsbD/D2; InterPro IPR000484:IPR005868; KEGG: ava:Ava_2512 photosystem II reaction centre protein PsbD/D2; PFAM: Photosynthetic reaction centre, L/M; SPTR: Photosystem II D2 protein; TIGRFAM: Photosystem II reaction centre protein PsbD/D2. (351 aa)
AFZ30707.1Hypothetical protein; PFAM: Domain of unknown function (DUF2382); PRC-barrel domain; TIGRFAM: conserved domain; COGs: COG3861 conserved hypothetical protein; InterPro IPR007903:IPR019060:IPR011756; KEGG: ana:all4050 hypothetical protein; PFAM: Domain of unknown function DUF2382, C-terminal; PRC-barrel; SPTR: All4050 protein; TIGRFAM: Conserved hypothetical protein CHP02271, C-terminal. (304 aa)
AFZ30708.1PFAM: Domain of unknown function (DUF2382); InterPro IPR019060; KEGG: npu:Npun_F5453 hypothetical protein; PFAM: Domain of unknown function DUF2382, C-terminal; SPTR: Putative uncharacterized protein. (311 aa)
psbBPhotosystem II chlorophyll-binding protein CP47; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbB subfamily. (518 aa)
AFZ32113.1Photosystem Q(B) protein; PFAM: Photosynthetic reaction centre protein; TIGRFAM: photosystem II, DI subunit (also called Q(B)); HAMAP: Photosystem II reaction centre protein PsbA/D1; InterPro IPR005867:IPR000484; KEGG: syf:Synpcc7942_1389 photosystem q(b) protein; PFAM: Photosynthetic reaction centre, L/M; SPTR: Photosystem Q(B) protein 2; TIGRFAM: Photosystem II reaction centre protein PsbA/D1. (360 aa)
psbCPhotosystem II 44 kDa subunit reaction center protein; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbC subfamily. (466 aa)
petDCytochrome b6-f complex subunit 4; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (160 aa)
psbA-3Photosystem Q(B) protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. (365 aa)
AFZ31352.1KEGG: cyc:PCC7424_0637 hypothetical protein; SPTR: Putative uncharacterized protein. (222 aa)
psbDPhotosystem II D2 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex. (351 aa)
AFZ28836.1KEGG: cyc:PCC7424_0853 signal transduction histidine kinase (STHK), LytS; SPTR: Signal transduction histidine kinase (STHK), LytS. (234 aa)
psbAPhotosystem Q(B) protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. (360 aa)
psbA-2Photosystem Q(B) protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. (360 aa)
AFZ30177.1Hypothetical protein; PFAM: Domain of unknown function (DUF2382); PRC-barrel domain; TIGRFAM: conserved domain; COGs: COG3861 conserved hypothetical protein; InterPro IPR007903:IPR019060:IPR011756; KEGG: ava:Ava_1657 hypothetical protein; PFAM: Domain of unknown function DUF2382, C-terminal; PRC-barrel; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02271, C-terminal. (295 aa)
Your Current Organism:
Gloeocapsa sp. PCC7428
NCBI taxonomy Id: 1173026
Other names: Chroococcus sp. Cey un, G. sp. PCC 7428, Gloeocapsa sp. ATCC 29159, Gloeocapsa sp. PCC 7428
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