Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ESE81387.1 | ESE82896.1 | SEI61121_20760 | SEI61121_16218 | Transcriptional regulatory protein entR; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Outer membrane protein; COG3528 Uncharacterized protein conserved in bacteria. | 0.602 |
| ESE81387.1 | ESE83234.1 | SEI61121_20760 | SEI61121_14943 | Transcriptional regulatory protein entR; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | High-affinity nickel-transport protein; Efflux system for nickel and cobalt. | 0.414 |
| ESE81387.1 | ESE83235.1 | SEI61121_20760 | SEI61121_14948 | Transcriptional regulatory protein entR; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Hypothetical protein; COG3683 ABC-type uncharacterized transport system, periplasmic component. | 0.465 |
| ESE81387.1 | ESE83807.1 | SEI61121_20760 | SEI61121_13454 | Transcriptional regulatory protein entR; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Conjugative transfer protein. | 0.723 |
| ESE81387.1 | ESE84824.1 | SEI61121_20760 | SEI61121_11576 | Transcriptional regulatory protein entR; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Virulence effector protein; COG4458 Uncharacterized protein conserved in bacteria, putative virulence factor. | 0.770 |
| ESE81387.1 | ESE84825.1 | SEI61121_20760 | SEI61121_11581 | Transcriptional regulatory protein entR; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Virulence protein SrfB; COG4457 Uncharacterized protein conserved in bacteria, putative virulence factor. | 0.668 |
| ESE81387.1 | ESE84826.1 | SEI61121_20760 | SEI61121_11586 | Transcriptional regulatory protein entR; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | ssrAB activated protein. | 0.753 |
| ESE81387.1 | ESE85920.1 | SEI61121_20760 | SEI61121_09114 | Transcriptional regulatory protein entR; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.738 |
| ESE81387.1 | ESE87559.1 | SEI61121_20760 | SEI61121_02160 | Transcriptional regulatory protein entR; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Autotransporter/pertactin; COG3468 Type V secretory pathway, adhesin AidA. | 0.767 |
| ESE81387.1 | ESE87567.1 | SEI61121_20760 | SEI61121_02200 | Transcriptional regulatory protein entR; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | COG3921 Uncharacterized protein conserved in bacteria. | 0.550 |
| ESE81387.1 | ESE88143.1 | SEI61121_20760 | SEI61121_01040 | Transcriptional regulatory protein entR; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | COG4332 Uncharacterized protein conserved in bacteria. | 0.583 |
| ESE81387.1 | fliT | SEI61121_20760 | SEI61121_06161 | Transcriptional regulatory protein entR; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Flagellar biosynthesis protein FliT; Dual-function protein that regulates the transcription of class 2 flagellar operons and that also acts as an export chaperone for the filament-capping protein FliD. As a transcriptional regulator, acts as an anti-FlhDC factor; it directly binds FlhC, thus inhibiting the binding of the FlhC/FlhD complex to class 2 promoters, resulting in decreased expression of class 2 flagellar operons. As a chaperone, effects FliD transition to the membrane by preventing its premature polymerization, and by directing it to the export apparatus. | 0.516 |
| ESE82896.1 | ESE81387.1 | SEI61121_16218 | SEI61121_20760 | Outer membrane protein; COG3528 Uncharacterized protein conserved in bacteria. | Transcriptional regulatory protein entR; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | 0.602 |
| ESE82896.1 | ESE83807.1 | SEI61121_16218 | SEI61121_13454 | Outer membrane protein; COG3528 Uncharacterized protein conserved in bacteria. | Conjugative transfer protein. | 0.422 |
| ESE82896.1 | ESE84824.1 | SEI61121_16218 | SEI61121_11576 | Outer membrane protein; COG3528 Uncharacterized protein conserved in bacteria. | Virulence effector protein; COG4458 Uncharacterized protein conserved in bacteria, putative virulence factor. | 0.700 |
| ESE82896.1 | ESE84825.1 | SEI61121_16218 | SEI61121_11581 | Outer membrane protein; COG3528 Uncharacterized protein conserved in bacteria. | Virulence protein SrfB; COG4457 Uncharacterized protein conserved in bacteria, putative virulence factor. | 0.483 |
| ESE82896.1 | ESE84826.1 | SEI61121_16218 | SEI61121_11586 | Outer membrane protein; COG3528 Uncharacterized protein conserved in bacteria. | ssrAB activated protein. | 0.629 |
| ESE82896.1 | ESE85920.1 | SEI61121_16218 | SEI61121_09114 | Outer membrane protein; COG3528 Uncharacterized protein conserved in bacteria. | Hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.731 |
| ESE82896.1 | ESE87559.1 | SEI61121_16218 | SEI61121_02160 | Outer membrane protein; COG3528 Uncharacterized protein conserved in bacteria. | Autotransporter/pertactin; COG3468 Type V secretory pathway, adhesin AidA. | 0.635 |
| ESE82896.1 | ESE87567.1 | SEI61121_16218 | SEI61121_02200 | Outer membrane protein; COG3528 Uncharacterized protein conserved in bacteria. | COG3921 Uncharacterized protein conserved in bacteria. | 0.431 |
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